Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04692 atgatgaTTAGTGACAAAATTAAGGTTGCTGCAAAATGTTGCAATTTGTTGTTCATCACAACCTCTTTGCTTTTACTTATCTCAGGGATATGTGTTCATTCTTTGGATTATGATTATTCTGCAACTATTGAGTGTATGAAAGAACCTCAGAGGGCACAATATGGAGGGGGCATTATAGTAAATTCAGAATTTGAACACAACATAGATGGCTGGTCAGTGTTTGGAAATGGAACCATTGAGgaaaacatatcaaatgatgGAAATAGATTCATTGTTGTTAGAAACAGAACACAAACATTAGATAGTTTTTCACAAAATGTTCAACTCAAGAAAGGATTGATTTACATGTTTTCAGCTTGGCTTCAGCTGAATGAAGGGAGTGACATGGTCTcagttttgtttaaaacaaatGGAAGTGAATTGATACATGGTGGCCATGTGATAGCAAAACATGGATGTTGGTCTCTTCTAAAAGGCGGCATAGTCGCAAACTTCTCAACCCCTGCTGAAATTCTTTTTGAGAGCAATAATCCAAGTGTGGAAATATGGGCTGATAGTGTGTCTTTGCAACCATTTACTAAAGAGGAATGGAGATCACACCAAGACAACAACATTGAAAATGTACGTAAGAGCAAGGTTAGATTCCATGTAACTCATGTAAATGAATCAGCATTGGAAGGAGCAAAAATTgtcataaaacaaacaaaatcagaTTTCCCATTTGGATGTGGTATGAACCATAATATCCTCACAAATAATGATTACCAAAAATGGTTTGTGTCAAGATTCAAATACACAACTTTCACCAATGAAATGAAATGGTATAGTACAGAGAAAATTCAAGGCCAAGAAAACTATACTATTGCAGATGGAATGTTACTATTTACCAAACAAAATGGAATTTCTGTTAGAGGTCACAACATTTTTTGGGACGACGAAAAATACCAACCTAAATGGGTTACATCCTTATCACCGGAAGAATTGCACGAAGCCGCGGAAAAAAGAATTAAATCTGTTGTTACAAGATATAAAGGAGACTTGATTGCATGGGATGTGATGAATGAGAATCTACATTTTCACTTTTATGAGGATAAACTTGGTAAAAATGCATCTGAATCATACTATTTAAAAGCTCACGAGCTTGATTCAAAAACAACAAAGTTTATGAATGAGTATAATACTATTGAATATAGTGGTGATAAAGTTGCAAGCCCAGCaaactattacaaaaaaattggtGAGATTTTGCAATCTGGAGAAGCTACTGAAATGTCATTTGCCATTGGATTGCAATGTCATTTTGCAGGTGGTCAACCAAATCTTGCTTACATGAGGTCAGGTCTTGATTTTCTTGGTGAAATTGGATATCCAATATGGCTCACAGAAACTAGTGTGGATCCTCAGCCAGAGCAGGCAAAGTATTTTGAAGAGATACTAAGAGAAGGTTACTCTCATAGAGCTGTTGAAGGGATTATAATGTTTGCTGGTCCAGCACAAGCTGGTTTCAACACTACACTCCTTGCAGATGCAAATTTTCAAACAACTTCAACTGGACAAGTTGTTGACAACTTGATATATGAGTGGGGAACTGGACCTAAAACAGCCATAGTAGATAGTAGAGGAATTGTAGATATTTCATTACATCATGGAGATTATGATTGTGTGAAAGAACCAAAGAGGGCACAATATGGAGGTGGAATTATAGTAAATCCAGGATTTGATCACAACATAAAAGGATGGACAGTGTTTGGAAATGGAACAATCCAGAAACGAACATCAAATGATGGAAATACATTCATTGTAGCCAGCAACAGAACACAACCATTGGATAGTTTTGCACAAAAGGTCCAACTGAAGAAAGGAGTAATATATACTTTTTCCGCTTGGTTTCAGCTCAGTGAAGGAAGTGATATTGTGTCAGTTGTATTTAGAATAAATGGAAGTGATCTGGTGCGAGGTGGCCATGTTATAGCAAAGCATGGATGCTGGTCTCTTCTAAAAGGTGGCATAGTTGCAAATTATACAAGCCCTGCTGAGATTCTTTTTGAGAGTGAGAATCCAACAGTGGAGTTATGGGCTGATAGTGTTTCCTTACAACCATTCACCATAAAGCAATGGAGATCACACCAAGACAATAGCATTGAAAGGGTACGTAAGAGTAAGGTGAGATTCCAGGTGCAATACTTTGAAGAGATACTGAGAGAGGCTTATTCTCATCCAGCTGTTCAAGGGATTATATTGTTTGAAGGTCCAGCACAAGCCGGTTTCGTCTATACACTCCTTGCAGACAGGAATTTTCGAAATACTCCTAGTGGAGACGTTGTGGACAAGCTAATTAAAGAGTGGGGAACTGGACCTAAAACAACCATAGCAGATAGTAGAGGAATTGTAGATATTTCATTACATCATGGAGATTATGATGTTACTATTACACATCCTCTAACTCAATACTCCAAAAAATTGAATCTAAGTGTAAGAAATGGATTTTCACCGGATACGATCCATGTGAAAATGAATGCCTAA 2523 0.3611 MMISDKIKVAAKCCNLLFITTSLLLLISGICVHSLDYDYSATIECMKEPQRAQYGGGIIVNSEFEHNIDGWSVFGNGTIEENISNDGNRFIVVRNRTQTLDSFSQNVQLKKGLIYMFSAWLQLNEGSDMVSVLFKTNGSELIHGGHVIAKHGCWSLLKGGIVANFSTPAEILFESNNPSVEIWADSVSLQPFTKEEWRSHQDNNIENVRKSKVRFHVTHVNESALEGAKIVIKQTKSDFPFGCGMNHNILTNNDYQKWFVSRFKYTTFTNEMKWYSTEKIQGQENYTIADGMLLFTKQNGISVRGHNIFWDDEKYQPKWVTSLSPEELHEAAEKRIKSVVTRYKGDLIAWDVMNENLHFHFYEDKLGKNASESYYLKAHELDSKTTKFMNEYNTIEYSGDKVASPANYYKKIGEILQSGEATEMSFAIGLQCHFAGGQPNLAYMRSGLDFLGEIGYPIWLTETSVDPQPEQAKYFEEILREGYSHRAVEGIIMFAGPAQAGFNTTLLADANFQTTSTGQVVDNLIYEWGTGPKTAIVDSRGIVDISLHHGDYDCVKEPKRAQYGGGIIVNPGFDHNIKGWTVFGNGTIQKRTSNDGNTFIVASNRTQPLDSFAQKVQLKKGVIYTFSAWFQLSEGSDIVSVVFRINGSDLVRGGHVIAKHGCWSLLKGGIVANYTSPAEILFESENPTVELWADSVSLQPFTIKQWRSHQDNSIERVRKSKVRFQVQYFEEILREAYSHPAVQGIILFEGPAQAGFVYTLLADRNFRNTPSGDVVDKLIKEWGTGPKTTIADSRGIVDISLHHGDYDVTITHPLTQYSKKLNLSVRNGFSPDTIHVKMNA 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04692 840 SUPERFAMILY (Trans)glycosidases 718 785 IPR017853 -
Tsu01g04692 840 SMART glyco_10 272 525 IPR001000 GO:0004553|GO:0005975
Tsu01g04692 840 Gene3D - 555 701 - -
Tsu01g04692 840 Gene3D - 46 192 - -
Tsu01g04692 840 Pfam Glycosyl hydrolase family 10 235 472 IPR001000 GO:0004553|GO:0005975
Tsu01g04692 840 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 226 524 IPR001000 GO:0004553|GO:0005975
Tsu01g04692 840 SUPERFAMILY Galactose-binding domain-like 564 699 IPR008979 -
Tsu01g04692 840 Pfam Carbohydrate binding domain 57 134 IPR003305 GO:0016798
Tsu01g04692 840 Pfam Carbohydrate binding domain 566 639 IPR003305 GO:0016798
Tsu01g04692 840 PANTHER GLYCOSYL HYDROLASE 43 558 IPR044846 GO:0004553|GO:0005975
Tsu01g04692 840 PANTHER HYDROLYZING O-GLYCOSYL COMPOUNDS, PUTATIVE-RELATED 554 728 - -
Tsu01g04692 840 SUPERFAMILY Galactose-binding domain-like 55 191 IPR008979 -
Tsu01g04692 840 Gene3D Glycosidases 229 529 - -
Tsu01g04692 840 PANTHER GLYCOSYL HYDROLASE 554 728 IPR044846 GO:0004553|GO:0005975
Tsu01g04692 840 PANTHER GLYCOSYL HYDROLASE 725 836 IPR044846 GO:0004553|GO:0005975
Tsu01g04692 840 PANTHER HYDROLYZING O-GLYCOSYL COMPOUNDS, PUTATIVE-RELATED 43 558 - -
Tsu01g04692 840 PANTHER HYDROLYZING O-GLYCOSYL COMPOUNDS, PUTATIVE-RELATED 725 836 - -
Tsu01g04692 840 SUPERFAMILY (Trans)glycosidases 226 531 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04692 Tsu-Chr1 54255023 54263393 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04692 725 825 Glycoside Hydrolase AT4G33840 41.748 2.84e-22 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04692 - - gmx:100777980 810.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04692 01 54255023 54263393 Tsu01g04692 01 54255023 54263393 ECH