Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04687 atggcagctggtggaggtggtggtggtggaggtggAGGAAAAGTTGATGAGTTTCAACCTCATCCTGTTAAGGAACAACTTCCTGGTGTTGATTACTGCATTAAAAGCTCACCTTCATGGCCTGAAGTGATTTTTCTTGGGTTTCAACACTACCTTGTCATGCTTGGAACCATTGTCATCATTTCAACTATACTTGTTCCTTTGATGGGTGGTGGAAATGTGGAAAAAGCTCAAATGATTCAAACGATGCTTTTTGTTGCTGGGATCAAAACATTGTTGCAAACTTTGGTTGGAACTAGACTACCTGTGGTTATAGGATCTTCCTTTGCTTTCCTTATACCAGCTATTTCTGTTGCTTTTTCAACTAGAATGAGCACATTCCTCAATCCTAATCAGAGGTTCAAGCAATCCATTAGAGCTGTACAAGGTGCTTTGATAATTGCTTCTTTTGTTCAAGCCTTGATTGGATTTTTTGGGTTCTGGAGTATTTTTGCAAGGTTTCTCAGCCCTCTAAGCGCCGTTCCCCTTGTCACTCTGACTGGCTTAGGACTCTTTGTATTATGGTTTCCAAGATTGGCTGATTGTGTTGAAATTGGTCTCCCTGCATTGATCATTCTGGTCATCCTGTCCCAATACATTCCACAAAAGATGAAATCAAGAGGATTCGATCGAGTTGCAATAGTAGTCACAATTGGAATTACATGGACATTTGCTGAAATTTTGACTGCAGCGGGTGCATATAACAAAAGACCACCGATGACTCAAATCAACTGCCGTACTGACCGATCAGGATTGATTTCTGCAGCTTCTTGGATAAAAGTTCCATATCCATTGCAATGGGGAAGCCCTACTTTCAATGCTGGTGATATATTTGCAATGATTGCTGCTTCTCTTGTTGCTATTGTAGAGTCAACCGGGACATTCATTGCGGCATCGAGGTTTGGCAGCGCAACACCAGTTCCACCTTCTGTGCTTAGCCGCGGTGTTGGCTGGCTGGGTGTAGGCACTCTTCTGGATGGCCTTTTTGGCGCAGCAACTGGATCCGCTGCATCAGTCCAAAATGCAGGACTGTTGGGTCTAACACGTGTTGGGAGCCGAAGAGTCATTCAAATATCTGCCGGATTCATGTTTTTCTTCTCTATATTTGGCAAATTTGGAGCAGTGATTGCTGCAATACCACTGCCAATAATAGCAGCTGTATATTGCGTCCTCTTTGCTTATGTCGGTTCAGCTGGACTTGGTTTTCTTCAATTCTGCAATCTCAACAGCTACAGATCGATGTTTATCGTTGGCTTTTCTCTCTTTCTCGGTCTCTCCATTCCACAATATTTCAACCAATCTATCGTTCTATCTGGACACGGCCCTGTTCAAACTGGCTCTACCTCGTTCAACAATATTGTGCAAGTGATTTTCTCATCTCCAGCTACTGTGGCAATTATAGTTGCTTATTTCTTGGATGCCACTATGAGTCCTGCACATGCCTCAACTCGCCGCGACAGTGGGAGACACTGGTGGGAAAAATTCAGAAGCTACAATCAGGATATCAGAAGTGATGAGTTCTATGCATTACCTATGAGACTTAACAGATTTTTCCCTTCATACTGA 1605 0.4187 MAAGGGGGGGGGGKVDEFQPHPVKEQLPGVDYCIKSSPSWPEVIFLGFQHYLVMLGTIVIISTILVPLMGGGNVEKAQMIQTMLFVAGIKTLLQTLVGTRLPVVIGSSFAFLIPAISVAFSTRMSTFLNPNQRFKQSIRAVQGALIIASFVQALIGFFGFWSIFARFLSPLSAVPLVTLTGLGLFVLWFPRLADCVEIGLPALIILVILSQYIPQKMKSRGFDRVAIVVTIGITWTFAEILTAAGAYNKRPPMTQINCRTDRSGLISAASWIKVPYPLQWGSPTFNAGDIFAMIAASLVAIVESTGTFIAASRFGSATPVPPSVLSRGVGWLGVGTLLDGLFGAATGSAASVQNAGLLGLTRVGSRRVIQISAGFMFFFSIFGKFGAVIAAIPLPIIAAVYCVLFAYVGSAGLGFLQFCNLNSYRSMFIVGFSLFLGLSIPQYFNQSIVLSGHGPVQTGSTSFNNIVQVIFSSPATVAIIVAYFLDATMSPAHASTRRDSGRHWWEKFRSYNQDIRSDEFYALPMRLNRFFPSY 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04687 534 Pfam Permease family 43 444 IPR006043 GO:0016020|GO:0022857|GO:0055085
Tsu01g04687 534 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER 7-RELATED 6 533 - -
Tsu01g04687 534 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 6 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04687 Tsu-Chr1 54187450 54191375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04687 14 534 Organic Solute Cotransporters AT1G49960 67.304 0.0 710
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04687 - K23717 gmx:100820533 874.004
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04687 01 54187450 54191375 Tsu01g04687 01 54187450 54191375 ECH