Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04679 ATGAAACTCAGACTCAGATCTTTAGAATCcaaagaaaccctaaaaatcgAAGTTCCTGATCCATGTTCAATTCACCAACTCAAATCCACTATTTCTCACACCATCCCTTctccttcatcatcttcttcttcttctcttcatctcTCCCTCAACAGAAAAGACGAAATCAACTCTTCCTCTCCGAACGATAATGAATCCCTCCACTCACTCGGCATCGCCGCCGGCGATCTCATCTTCTACACTTTCAACCCCAACGCCTTCTCCCGTGAAACCCTCCCTCACAAACCCACCCCACAACAACAAACCAATTCCAACGATAACGACCCACCCATCATCCAAAACTCGCCGGAAATTACCATGACTGACGCTGATTCAACTCCCATGACTGAAAAGTTTCCAACTTTGGAAACCCCAGAACCGGAAATCATGGAAATCGTTGATGGGTCTGATGAGGCTGTGTTGGTCACGAAGGACATTACAGAACCTGATTTTGTGAAAAGGGTGATTAGAGAAGCGCTTGGTGATGATGTTAATGATTTCAAGCTACTAGTATTTGGTGTTCATGCTGTTATTCTTGAATCTGGGTTTGTTCGTGTTGATCAAGTTTCGGGTAGGGCCATTAGTTGCTCACATCTTGTTGATAACATGTCTTCTTCTTCAATGATATCTTTGAGGTATACTCTTCCTGAGATTCTTACTAATGGTTTATCTCGTTCTGTTAATTTGAAAATTCAGACATTAGGGAattttgtgaatgtttatggtTCTTTGTCTAATGACGTTGGTTCAAGGGTGCATAAGGTTTATTTAGATAAATGTAGATTTGCTAGGCCTTTAGAGTTGATGATGCTGTCAAATTCTGAATCTAATGCTAGTGTTAGTGCTAATGTTAATGATGATGGAGATGAGGTTTTTGAATTGTGGAAGATAGTGAAAGATAGGCTTGTATTGCCACTTTTAATTGATCTTTGTGATAAAGCTGGATTGGATCTTCCACCGTGTTTTATGCGGCTTCCAATGGAACTTAAGCTCTTGATATTTGAGTATCTTCCTGCTGATGATTTGGCTAAAGTGTGTTGCACATGTTCTGAATTGCAATACCTTGCGTCAAATGATGAGTTGTGGAAGAAGAAGTTTGAGGGGGAGTTTGGACAAAGGACGGATGGTATGAAGTATTTTAAGAACTTGTTTGCTTTATACCGGGCAACAAAGAAGAAAGCAGAGGAACCACATCCTTTTCGAATTCCTCGTTCTGGTATCATGAGATACTTTCAAAGGAGGAGGGGAGGTCATTTTCCAATTTGGGGTGGAGAGTATGATCTGCAGCCAGATTTTGGTGTAAATTCCTCTGGATACAGACGAAGGCAAAGTTTCATTCCCCCATGTCGTCTTGGAGGATTTTGA 1404 0.3917 MKLRLRSLESKETLKIEVPDPCSIHQLKSTISHTIPSPSSSSSSSLHLSLNRKDEINSSSPNDNESLHSLGIAAGDLIFYTFNPNAFSRETLPHKPTPQQQTNSNDNDPPIIQNSPEITMTDADSTPMTEKFPTLETPEPEIMEIVDGSDEAVLVTKDITEPDFVKRVIREALGDDVNDFKLLVFGVHAVILESGFVRVDQVSGRAISCSHLVDNMSSSSMISLRYTLPEILTNGLSRSVNLKIQTLGNFVNVYGSLSNDVGSRVHKVYLDKCRFARPLELMMLSNSESNASVSANVNDDGDEVFELWKIVKDRLVLPLLIDLCDKAGLDLPPCFMRLPMELKLLIFEYLPADDLAKVCCTCSELQYLASNDELWKKKFEGEFGQRTDGMKYFKNLFALYRATKKKAEEPHPFRIPRSGIMRYFQRRRGGHFPIWGGEYDLQPDFGVNSSGYRRRQSFIPPCRLGGF 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04679 467 PANTHER F-BOX PROTEIN SKIP22 1 467 - -
Tsu01g04679 467 Gene3D - 161 335 - -
Tsu01g04679 467 Pfam F-box-like 337 377 IPR001810 GO:0005515
Tsu01g04679 467 Gene3D - 1 94 - -
Tsu01g04679 467 MobiDBLite consensus disorder prediction 89 132 - -
Tsu01g04679 467 MobiDBLite consensus disorder prediction 30 64 - -
Tsu01g04679 467 Gene3D - 336 412 - -
Tsu01g04679 467 PANTHER F-BOX PROTEIN SKIP22 1 467 - -
Tsu01g04679 467 SUPERFAMILY F-box domain 332 390 IPR036047 GO:0005515
Tsu01g04679 467 MobiDBLite consensus disorder prediction 89 133 - -
Tsu01g04679 467 ProSiteProfiles F-box domain profile. 332 378 IPR001810 GO:0005515
Tsu01g04679 467 SMART fbox_2 338 378 IPR001810 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04679 K10293 - gmx:100796338 489.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04679 01 54139795 54141787 Tsu01g04679 01 54139795 54141787 ECH