Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04673 ATGGCCATGGTTTTGAAGTCAATGGCTGCTACTTCATCTGTGAGACAATCTACTACTATATTTGTAAACCCTTTAAATCATCATGTTTCAAATCTTAGATTTTGTTACAAGGGAGAACAGAAATGGAAACATGGGTTTAAGGTTTCAGCAACAGTGGAATTGGGTGTCGAGGGTTTAAAAAGAACAACAAGCAATGTTGTTGTTCCATTGGAAGGAGGAACTTTGGGTTTGGATATGGTTTCAGAAGGAGAGTTAATGGTGAAGGGTTTTAAAGGGTTGAGGAAGACAAAGCTTGTTTGCACGGTTGGTCCTGCTTGTAGTTCATTGGAGGATTTAGAGAAATTGGCATTAGGAGGAATGAATGTTGCAAGGCTTAATATGTGTCATGGTACTAGAGAATGGCATCGTGATGTTATTAGGAAGATTAAGAAGTTGAATGAGGAAAAAGGTTTTTCTGTTTCTGTTATGATTGATACTGAGGGTAGTCAGATTCATGTTGTTGATCACGGAGCACCTTCCTCGGTTAAAGTTGAGGAAGATTCAATCTGGTTGTTTACTGCTGATAAATATGAGGGTTCTCGTCCATTGACATTTCAAGCAAACTATCCAGGTTTTTCTGAAGGCATTGAAGTAGGTGATGAACTTGTTATTGATGGTGGAATGGCATGCTTTGTAGTCACTGAAAAAATCGGAAAAGATTTGCATTGTAAGTGCACAGATGCTGGTCTTTTCTTACCTGGAGCTAAATTTAGTTTCTGGAGAGATGGAAAGCTTGTAAGGAGGAATTACAATCTCCCTACAGACCGTACTCTATCAACTAAGGATTGGGCTGACATTAACTTTGGTATAGCTGAGGGTGTTGATTTTTTTGCCCTATCCTTTGTCAATCATGCCGACTCTGTCAAGGATTTAAAGAGCTACCTCTCTGGCAAATCAACCAAATCCATAAAAGTAGTGGCAAAGATAGAAAGCTTAGAATCCCTTCATAATCTGGAGGAAATAGTTAAAGCTTCTGATGGAATCATGGTAGCTCGTGGTGACCTTGGAGTCGAAATACCACTTGAACAGATTCCTACAGTCCAGGAGGATATAATTAACATttgcagaaaacaaaataaGCCAGTGATTGTAGCTTCTCAGCTTCTTCAGTCAATGGTTGAATATCCAACACCAACTCGTGCCGaggtaaaaaaacaatttatacatCTAGGATGA 1215 0.3835 MAMVLKSMAATSSVRQSTTIFVNPLNHHVSNLRFCYKGEQKWKHGFKVSATVELGVEGLKRTTSNVVVPLEGGTLGLDMVSEGELMVKGFKGLRKTKLVCTVGPACSSLEDLEKLALGGMNVARLNMCHGTREWHRDVIRKIKKLNEEKGFSVSVMIDTEGSQIHVVDHGAPSSVKVEEDSIWLFTADKYEGSRPLTFQANYPGFSEGIEVGDELVIDGGMACFVVTEKIGKDLHCKCTDAGLFLPGAKFSFWRDGKLVRRNYNLPTDRTLSTKDWADINFGIAEGVDFFALSFVNHADSVKDLKSYLSGKSTKSIKVVAKIESLESLHNLEEIVKASDGIMVARGDLGVEIPLEQIPTVQEDIINICRKQNKPVIVASQLLQSMVEYPTPTRAEVKKQFIHLG 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04673 404 PANTHER PYRUVATE KINASE 35 396 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Tsu01g04673 404 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 88 396 IPR015813 GO:0003824
Tsu01g04673 404 PANTHER PYRUVATE KINASE 35 396 - -
Tsu01g04673 404 PRINTS Pyruvate kinase family signature 287 301 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Tsu01g04673 404 PRINTS Pyruvate kinase family signature 370 394 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Tsu01g04673 404 PRINTS Pyruvate kinase family signature 318 344 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Tsu01g04673 404 PRINTS Pyruvate kinase family signature 151 167 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Tsu01g04673 404 PRINTS Pyruvate kinase family signature 345 369 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Tsu01g04673 404 Gene3D - 163 265 IPR015806 GO:0004743|GO:0006096
Tsu01g04673 404 ProSitePatterns Pyruvate kinase active site signature. 316 328 IPR018209 GO:0004743|GO:0006096
Tsu01g04673 404 SUPERFAMILY PK beta-barrel domain-like 164 247 IPR011037 -
Tsu01g04673 404 Pfam Pyruvate kinase, barrel domain 94 397 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Tsu01g04673 404 Gene3D - 96 397 IPR040442 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04673 Tsu-Chr1 54086683 54089503 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04673 K00873 - gmx:100780644 584.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04673 01 54086683 54089503 Tsu01g04673 01 54086683 54089503 ECH