Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04508 atggatgaaaaacaaaggaaaaaacataTTAGGGAACCACCTTCAATTCCTTTCATTTGGGAAACAAAACCAGGCATTCCTATAAAAGATTGGAAACCAGTAGACACATCATTTTGTCAATTACCAAAAACTCCTCTCAAACAAATTGCATCAGTTCCCTTTGTTTGGGAGGAAAAGCCAGGAATACCCTTCCCTACAGCCATTACACTGCAGCAAAATTCATTGTCAAAAAACACTTGTGATAAGTTATATATTTCATCCTCTCCAGCTTCTCCAGCTTCATCAGAGAGTGATAGTAGTATAAGCAGTTATGAAACTGGAAGATCAAGTTTAACTGGTTCTGCTTTTTTGGAATGTTTGTTTCCTTTGTTTCCACCAAAGGCTGGTTTTCTTGAAAAGGATATTGGTTATACTGAAAAGGTAGGTTCAAGTTTAGTTGAACTAAATGGCAATGATTTTGAGTTTGGAGATTATACTTTTGGCGTGTCAAAGAAGCAACCAACACTTGGAGAGCTTATTATGATGAGCAGAAGAAGAAGCTGTAGAAGAAAAGCAACTCAAATGAACAAATGGGATCCACCAAAGAAAACCACAAGAAAGCAAGCTTTTGGATGTTTCTCAACTCTAACAAGCAGCAGTATGATTGAAGGACTGCTCAAGAGAAAGTACTATCCGAGGCTGAAACTACTCTAG 693 0.3636 MDEKQRKKHIREPPSIPFIWETKPGIPIKDWKPVDTSFCQLPKTPLKQIASVPFVWEEKPGIPFPTAITLQQNSLSKNTCDKLYISSSPASPASSESDSSISSYETGRSSLTGSAFLECLFPLFPPKAGFLEKDIGYTEKVGSSLVELNGNDFEFGDYTFGVSKKQPTLGELIMMSRRRSCRRKATQMNKWDPPKKTTRKQAFGCFSTLTSSSMIEGLLKRKYYPRLKLL 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04508 230 Pfam Protein of unknown function (DUF688) 7 41 IPR007789 -
Tsu01g04508 230 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 2 66 - -
Tsu01g04508 230 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 69 229 - -
Tsu01g04508 230 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 2 66 - -
Tsu01g04508 230 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 69 229 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04508 - - var:108325673 182.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04508 01 52689063 52689973 Tsu01g04508 01 52689063 52689973 ECH