Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04506 ATGGAGAACAACACTGTTGTTAAACTTCGATGCCAGAGGATTGGTTGCGATGCTATGTTCACCGAAGACGATAATCTCGATGGTTCCTGTCAATACCATGATTCGGGACCTTTATTTCATGATGGGATGAAAGAATGGAGTTGCTGCAAGAAAAGAAGTCACGATTTCAGCTTATTTTTGGAAATTCCGGGATGTAAGACGGGAAAACATACGACAGAGAAGCAAGTAATTGCACCGACTAAGAAAAAGCCTGTGCCTCCTCCAACTGGAGCTCCCTCAACCAATGCCAATCCATCGACGAAGGACTCTTGTTCTAGGTGTCGGCAGGGTTTCTTTTGCTCAGATCATGGTTCACAAAACAAACCTGTAACTATTGTTGGAGAGAAATCTATAAATCTTGCTGGAGATGCATCAACAGAAAACAATTCAAGCGTTGAGGTTTCGAAACCTCCTAAAAAGATAGTCGGCTTAAATGAGCCGCAaatatgcaaaaataaaggATGCGGTCAAACTTTCAAGGAAAAAGATAATCATGACACTGCTTGCAGTTACCATCCTGGCCCTGCTGTTTTTCACGACGGGATGAAAGGGTGGAAGTGCTGCAATGTTCATGTAAAAGAATTTGACGAGTTTATGAGCGTTCCTCCTTGCACAAAGGGATGGCATAATGCCGATCCAGTGTCCTGA 687 0.425 MENNTVVKLRCQRIGCDAMFTEDDNLDGSCQYHDSGPLFHDGMKEWSCCKKRSHDFSLFLEIPGCKTGKHTTEKQVIAPTKKKPVPPPTGAPSTNANPSTKDSCSRCRQGFFCSDHGSQNKPVTIVGEKSINLAGDASTENNSSVEVSKPPKKIVGLNEPQICKNKGCGQTFKEKDNHDTACSYHPGPAVFHDGMKGWKCCNVHVKEFDEFMSVPPCTKGWHNADPVS 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04506 228 Pfam CHORD 162 222 IPR007051 -
Tsu01g04506 228 Pfam CHORD 10 70 IPR007051 -
Tsu01g04506 228 ProSiteProfiles CHORD domain profile. 11 70 IPR007051 -
Tsu01g04506 228 ProSiteProfiles CHORD domain profile. 163 222 IPR007051 -
Tsu01g04506 228 MobiDBLite consensus disorder prediction 71 102 - -
Tsu01g04506 228 Gene3D - 2 74 - -
Tsu01g04506 228 Gene3D - 156 225 - -
Tsu01g04506 228 PANTHER CYSTEINE AND HISTIDINE-RICH DOMAIN-CONTAINING PROTEIN RAR1 2 227 IPR043316 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04506 K13458 - gmx:100194419 395.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04506 01 52661289 52664461 Tsu01g04506 01 52661289 52664461 ECH