Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04505 ATGCTTCCTAAATCACTTCCCTCATCGCCCGAATCACAACCGTTCAAAATCTCCgatactaaaactaaaacttcCATCACAGCAATACTTCAATCACTTTTCTCCCTTCAAAATCCTCGCGCATGGATTCTCTTTACCGTCCTCTTCATCCAGATCCTTCTCTTCTTCAACCTCCGTAGCTTTCCCACCTCAATTTCTCCCCCTCACCACCAATTCCCCACTCGCCTCGCCGTAATTCAAACCGCCTCCACTCAAAATTCCACCTTATTGGATTCTGATTTTcattctgattctgattctaCTCCCACTACCACTACCGACGATCAATGCGCCAACGGTAGGGTTTTTGTCTACGACCTTCCGAAAttcttcaaccaagaaatcctCGATAATTGCGATAATCTCAATCCATGGAGTTCTCGTTGCGATGCTCTCTCCAACAACGGATTCGGACAAAGCGCAACCGGACTCGCCGGAATTATCCCGGAGAATCTACTTCCGACGTGGTACTGGACTGACCAATTCGTATCAGAAATCATTTTCCATAACCGTATTCTTAACCACAAGTGCAGAACCTTAGAGCCAGAATCAGCTGCGGCGTTCTACATACCATTCTACGCTGGACTCGCAGTCGGAAAGTACCTATGGTTGAACTCTTCCACAGCAAAGGATCGCGATCATCACTGTGAGATGATGCTGACGTGGCTTCTGGAACAACCTCATTACAAAAAATCCAACGGTTGGGATCATTTCATTACGATGGGACGCATCACATGGGATTTTCGTCGCTCCAAAGATGAAGATTGGGGTTCTAGTTGTATCTACAAGCCAGGGTTAAGAAACATCACGCGCCTTCTCATAGAGCGTAACCCGTGGGACTATTTCGACGTCGGTGTTCCCTACCCCACTGGATTCCACCCTAATTCCATTTCTGATGTCACTCTCTGGCAGAGCTTCGTCCGCGATCGCCGCCGCAACGCACTCTTTTGCTTCGCCGGAGCTCCACGCCGTGCCTTCAAGAACGATTTTAGAGCAATTCTATTGAATCAGTGTCATGATTCCGGTGGGTCGTGTCGCACCGTGGACTGCGGCGGGTCACGGTGTGCGAATGGCACGGCGGCGATCACTGAAACCTTTCTCGACTCTGATTTTTGTTTGCAGCCGAGAGGGGATAGTTTCACGCGCCGGTCTATTTTCGATTGTATGGTTGCTGGTTCGATTCCGGTTTTTTTCTGGCGGCGAACCGCTTATTTACAATATCAGGGTTTTTTACCTGATGAACCGGGGAGTTACTCGGTTTATATAGACCGAAATGCGGTTAAAAATGGTACATCCGTGAAAACCGTGCTTGAGAGTTACACGAAAGAAGAGGTGAAAAAAATGAGGGAAAAAGTGATTGAGTATATTCCTAGGATGGTGTATGCAAAACATAACAAAGGGATTGAGGGTGTTAAGGATGCATTTGATTATGCAATTGAAGGAGTATTAACAAGGTTTAAGGAACAACTACAACCTGGGTTTGATAAGTGGTAG 1533 0.4547 MLPKSLPSSPESQPFKISDTKTKTSITAILQSLFSLQNPRAWILFTVLFIQILLFFNLRSFPTSISPPHHQFPTRLAVIQTASTQNSTLLDSDFHSDSDSTPTTTTDDQCANGRVFVYDLPKFFNQEILDNCDNLNPWSSRCDALSNNGFGQSATGLAGIIPENLLPTWYWTDQFVSEIIFHNRILNHKCRTLEPESAAAFYIPFYAGLAVGKYLWLNSSTAKDRDHHCEMMLTWLLEQPHYKKSNGWDHFITMGRITWDFRRSKDEDWGSSCIYKPGLRNITRLLIERNPWDYFDVGVPYPTGFHPNSISDVTLWQSFVRDRRRNALFCFAGAPRRAFKNDFRAILLNQCHDSGGSCRTVDCGGSRCANGTAAITETFLDSDFCLQPRGDSFTRRSIFDCMVAGSIPVFFWRRTAYLQYQGFLPDEPGSYSVYIDRNAVKNGTSVKTVLESYTKEEVKKMREKVIEYIPRMVYAKHNKGIEGVKDAFDYAIEGVLTRFKEQLQPGFDKW 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04505 510 Pfam Exostosin family 110 449 IPR040911 -
Tsu01g04505 510 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 20 502 IPR004263 GO:0006486|GO:0016757
Tsu01g04505 510 PANTHER XYLOGLUCAN GALACTOSYLTRANSFERASE XLT2 20 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04505 Tsu-Chr1 52651701 52653753 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04505 - - gsj:114403132 757.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04505 01 52651701 52653753 Tsu01g04505 01 52651701 52653753 ECH