Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04503 ATGAAAGAGGTTCTTCTACTTGTTGTGCTCTCGTTGACCTTTCAATCGACCCTCTCAGTCTCAATGTTTGACTCCCAATCCGTTTCTCTACTGCCTCATGCTCATGAATCCTTCAATATCAGTTATATTCAGATGAAGAACGCTGCTACTTGTTCTTACTCGGTGGTTATATCTACTAGTTGTTCTTCTCCTAGGTATACAACGGACCAAATCAGTATTGCTTTTGGAGATGCTTATGGAAATCagATATATGCACCAAGATTGGATGATCCATCTTCTGGTACATTTGAGAGTTGTTATTCAGATACGTTTCAGATAAATGGTCCATGCGCATATCAGATATGCTATGTGTACCTCTATAGATCTGGCTCGAATGGTTGGAAACCTGACACTGTGAAAATCAATGGTTATAATGGCAGACCTGTTACTTTCTACTACAACACTTTCGTTCCCAGAGATACGTGGTTTGGGTTTGATTTGTGCAACAATGCTGCTTCTTCATACAAAGTAACTGCTCAGAAATATCTAACATTAGTAATTCTGGGATTTGTTCTaagttttttgttgtaa 570 0.3789 MKEVLLLVVLSLTFQSTLSVSMFDSQSVSLLPHAHESFNISYIQMKNAATCSYSVVISTSCSSPRYTTDQISIAFGDAYGNQIYAPRLDDPSSGTFESCYSDTFQINGPCAYQICYVYLYRSGSNGWKPDTVKINGYNGRPVTFYYNTFVPRDTWFGFDLCNNAASSYKVTAQKYLTLVILGFVLSFLL 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04503 189 CDD PLAT 51 162 - -
Tsu01g04503 189 Gene3D PLAT/LH2 domain 47 156 - -
Tsu01g04503 189 PANTHER EMBRYO-SPECIFIC PROTEIN ATS3B 6 188 - -
Tsu01g04503 189 PANTHER - 6 188 - -
Tsu01g04503 189 Pfam Embryo-specific protein 3, (ATS3) 43 161 IPR010417 -
Tsu01g04503 189 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 49 157 IPR036392 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04503 Tsu-Chr1 52640769 52643037 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04503 - - gmx:100305495 296.589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04503 01 52640769 52643037 Tsu01g04503 01 52640769 52643037 ECH