Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04483 ATGACAGAGATCGTAGCTCGGAAGAGAAAAATGGGAGACAGAAAGGAAAAAACTGCGCCAAAATGGCATTCCATCAAACCCAAAAACAATCTTCACGTTACTCCTTTGCGAGATTTCGATCTCTTCACGGTTCAGAATTTTTTCTCATCTTCTGAATCAAAGGCATTCATTGAAACTGCTGAGGGAATTGGTTTTACTCATCAAGGAAGTTTAGGTCCAGCTAAAGGTGAAGCTTATAGAGATAATGATCGAATATCGGTGAATGATCCTGTTCTTGCTGATTCAATTTGGGATTCTGGACTTAGTAAACTGTTTTCTGATATAAGAATTCGAGGAAAAGCCGCCGTAGGTTTGAATCCAAATATTAGATTATATAGGTACAAGGTTGGTCAAAGGTTTGGAAGACATATTGATGAAAGTAATGATCTTGGAGATGGAAAAAGGACTCGTTATACTTTGCTTGTTTATTTAAGTGGTGGACCTGGTGAACTTAAATCAAAGGCTAAAAATGATTCCAATAAAACTACAGATTCATCTTTTGATCGTTTAGTTGGAGGAGAAACAGTGTTCTATGGTTCAAGAAATAGCATTGTGGCCGAGGTTGCTCCCATTGAAGGGATGGCACTCTTGCACATTCATGGAGATAAATGCTTGTTGCACGAAGCCAGAAATGTTACAAAGGGTGTCAAATATGTGTTTCGTTCGGATGTTGTATTTGCTTGA 723 0.3831 MTEIVARKRKMGDRKEKTAPKWHSIKPKNNLHVTPLRDFDLFTVQNFFSSSESKAFIETAEGIGFTHQGSLGPAKGEAYRDNDRISVNDPVLADSIWDSGLSKLFSDIRIRGKAAVGLNPNIRLYRYKVGQRFGRHIDESNDLGDGKRTRYTLLVYLSGGPGELKSKAKNDSNKTTDSSFDRLVGGETVFYGSRNSIVAEVAPIEGMALLHIHGDKCLLHEARNVTKGVKYVFRSDVVFA 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04483 240 Gene3D q2cbj1_9rhob like domain 28 235 - -
Tsu01g04483 240 SMART p4hc 39 238 IPR006620 GO:0005506|GO:0016705|GO:0031418
Tsu01g04483 240 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 9 240 - -
Tsu01g04483 240 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 117 240 IPR005123 -
Tsu01g04483 240 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 9 240 IPR045054 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04483 - - gmx:100526938 386.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04483 01 52487872 52489538 Tsu01g04483 01 52487872 52489538 ECH