Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04449 ATGGGCAGTGTGCAGCTGTGGGAGACTCTGAAAGAGTCCATCGTTGCCTACACCGGTCTAGCTCCGACTACCTTCTTCACTGTCTTGGCTCTTCTATTTGCCTTTTACTACGTTGTTTCTGGTCTCTTTGGCTCCTCTTCATCTAACCGTCACAACCAAACCCGCCACTTCCAAGAGGAGGAGCTTCCTCCTCTTCGACCCCCTGTTCAGCTAGGTGAAATCACCGAAGAACAACTCAAAGCCTACGATGGCTCCGATCATGATAAACCCTTACTCATGGCTATTAAGGGTCAGATCTATGATGTCTCTCAGAGCAGGATGTTTTATGGACCCGGTGGACCTTATGCTTTATTTGCTGGGAAGGATGCTAGTAGAGCTTTAGCAAAGATGTCGTTTGAAGAGAAAGATCTGACTGGGGATATTTCTGGTCTTGGCCCATTTGAGCTCGACGCATTACAGGACTGGGAATACAAGTTTATGGAAAAGTATGCAAAGGTTGGAACTATTAAAAAGGAAGTTCCAGTTACTGAGGCTGAATCCAGCGGCGAACCATCAGAATCTACTCCCCGTGATGTTGATGCTGTTAAGCCAACTGAAGATGACAAGTCAGAAACTGCTGCAGCTGTTAAAAGTGACGAAACCCCTTCAAATGTTGATGCCGATAAAGCGTAA 672 0.4643 MGSVQLWETLKESIVAYTGLAPTTFFTVLALLFAFYYVVSGLFGSSSSNRHNQTRHFQEEELPPLRPPVQLGEITEEQLKAYDGSDHDKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELDALQDWEYKFMEKYAKVGTIKKEVPVTEAESSGEPSESTPRDVDAVKPTEDDKSETAAAVKSDETPSNVDADKA 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04449 223 MobiDBLite consensus disorder prediction 171 223 - -
Tsu01g04449 223 MobiDBLite consensus disorder prediction 184 208 - -
Tsu01g04449 223 Pfam Cytochrome b5-like Heme/Steroid binding domain 75 169 IPR001199 -
Tsu01g04449 223 PANTHER CYTOCHROME B5-LIKE HEME/STEROID-BINDING DOMAIN PROTEIN 4 217 - -
Tsu01g04449 223 PANTHER MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED 4 217 - -
Tsu01g04449 223 Gene3D - 72 170 IPR036400 -
Tsu01g04449 223 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 65 170 IPR036400 -
Tsu01g04449 223 SMART Cyt_b5_2 74 170 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04449 Tsu-Chr1 52183098 52185345 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04449 K17278 - gmx:100791779 348.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04449 01 52183098 52185345 Tsu01g04449 01 52183098 52185345 ECH
Tsu06g03114 06 41249262 41253073 Tsu01g04449 01 52183098 52185345 PCT