Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04440 ATGACAGATCAAGAGCAACCAAAAAAGTTAGAATCTGAATCAACATCGaatcctccaccaccaccaccacctgcTTCAACTGAGACTGTTACTACTACTCCTCCACCTCCTCCTCCTACTACTCCACCTGAGGCTCCAAAGGAATTGGTGGCTGAGGAGAAATCTGTAATTCCACAACCCtcacctcctcctcctcctcctgtTGTTGATGACTCAAAAGCTCTTGTCTTAGTTCAGAAGACTGATGAAGCTGCTGAAGAGAAACCAGAAGAGAAACCAAAAGAGGGTTCGATCAACCGAGATGCTGTGCTTGAAAGAGTTGCAACAGAAAAGAGGATTTCACTAATCAAAGCATGGGAAGAAAGTGAAAAGTCAAAAGCAGAGAACAAGGCTCAGAGAAAACTCTCAACCATTACAGCATGGGAAAACAGTAAGAAGGCTGCAACAGAAGCTGAATTGAGAAAACTTGAGGAACAATTGGAGAAGAAAAAGGGAGAATATGcagagaaaatgaaaaacaaaatagcaGCACTTCACAAGCTAGCTGAAGAAAAGAAGGCAATAATTGAGGCCAAGAAAGGTGAAGATTTACTCAAAGCAGAAGAGACAGCTGCAAAATATAGGGCAACTGGAACAGCTCCAAAGAAACTCTTTGGTTGTTTCTAA 666 0.3694 MTDQEQPKKLESESTSNPPPPPPPASTETVTTTPPPPPPTTPPEAPKELVAEEKSVIPQPSPPPPPPVVDDSKALVLVQKTDEAAEEKPEEKPKEGSINRDAVLERVATEKRISLIKAWEESEKSKAENKAQRKLSTITAWENSKKAATEAELRKLEEQLEKKKGEYAEKMKNKIAALHKLAEEKKAIIEAKKGEDLLKAEETAAKYRATGTAPKKLFGCF 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04440 221 MobiDBLite consensus disorder prediction 14 45 - -
Tsu01g04440 221 Pfam Remorin, N-terminal region 50 107 IPR005518 -
Tsu01g04440 221 PANTHER OS02G0117200 PROTEIN 18 221 - -
Tsu01g04440 221 Pfam Remorin, C-terminal region 111 216 IPR005516 -
Tsu01g04440 221 MobiDBLite consensus disorder prediction 76 103 - -
Tsu01g04440 221 Coils Coil 146 188 - -
Tsu01g04440 221 MobiDBLite consensus disorder prediction 1 103 - -
Tsu01g04440 221 PANTHER REMORIN 1.4 18 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04440 Tsu-Chr1 52112719 52115394 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04440 - - cam:101501168 248.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00285 05 2134334 2136635 Tsu01g04440 01 52112719 52115394 ECH
Tsu02g00485 02 4041353 4043585 Tsu01g04440 01 52112719 52115394 ECH
Tsu01g04440 01 52112719 52115394 Tsu01g04440 01 52112719 52115394 ECH