Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04438 ATGTTCAAGTCATGGAGCAAAAAAAACAAGATCAAAGCTGTATTCAAATTGGATTTTCAAGCAACTCAGGTTCCAAAGATGAAAAAGTCTGCATTAATGGTATCATTGGTGCCAGATGATGTTGGGAAACCAACAGTGAAACTAGAGAAAACTGCTGTACAAGATGGGACTTGTTTATGGGAGAATCCGATTTTCGAATCGGTTAAACTTGTCAGGGATTCAAAATCTGGAATTCTACATGAGAAAATCTACCATTTCATTGTTGCAACTGGTTCTTCAAAATCTGGCTATTTGGGAGAAGCTTCAATTGATTTTGCTGATTTTTTAACAGAAACTGAACCAATTACTGTTTCTTTGCCCTTGAAGTTTGCCAATTCCGGCGTAGTTTTACATGTAACTATTCAGAACGTGGAAGGATATACTGCTGAAAGAAATGGCGAAGATAATGGAGCTGAAGGAATTTATGATGATGGAAGCTTGAAACACCAACTGAGCTATGCCAGTACAGATGAAAGCTACAATCTGGAAGAAAACGGCAACTTGGCCAAGAGTAGATCTGAGTATTCTGAACAGAATGCATCTAATGGCATCAGTCCTGCGGTAGCATCATGGGATGACCCTTATAGCTTCAGACAGAACTCAATGCCACCAAGAGGATCAGTTGAGGTCAATGCAACGCAAAATCAAGTGCATAAGAGGTCAAATACAGGCTGGTCCATGGGTTCAGCATCAGATGGAAGTTTAGGTGACTGGACAAACAGTCCAAAAGAAAGATCACAAGAGCCTTCAGGCAATGCCACTGAAAATCTCAAAAGCGAAATTGTTTCTCTGAAGAGGCAGGCAGAACTATCGGAACTAGAGTTACAAGCGCTTCGGAAGCAGGTAGAAAAAGAAAGCATCCGGGGACAGAAtttatcgagacaaatcaaTGGTCTCAGAGACGAGAGAGATTCGTTCAAAACTAAATATGAGCAACTCAGGTCCCAAAATAACttcaataataatagtaatgaGACCAAAACCTCTAAAAACATGAAATCTGATATTGATAATACCAGGATTCAGTTAGAGGCAATAAAGGAAGAGCTTGTTTATGAAAAAGAAACGAGTGCCAATCTTCAATTGCAACTGCAGAAAACTCATAACTCAAACTCTGAACTTCTTTTGGCTGTCACTGACCTTGAAGAAATGTTAGAACAAAAGAATAAGGAAATACGGGATCTATCTTCCAAAGAGCATGATGATGACACAGAATTAGATCTTTTGCGGCAGAAGATTGCAGAGCAGAATAGGGAAATAGATAATTGTGTTAAGCAACGCGAGGAGCTAAGCGAGCTTATAAAAGAGCTCACTTTGGAGTATGATATTCTTAAGAATGAAAATGCCGATATCTCTTTGAGATTAAAGCAAGATGAAGCACAACATATCAGGTTGCAGAATGAACACTCAGCTTCTTTAGTTACAATACAACAACTTGAAACCCAAGTAAAGAGACTAGAAGAAAAGATAGAGATGCAAGAAGATGAATTTTCCTTGTCTTCGGTCTCCATCAAGGAACTTGAAAATCAAGTTAAGGCTTTGGAGAAAGAACTGAAATTACAGGCAGATAAATTTGAAGATGATATCCATGCAATGCAAAGTGCAAAATCTGAGCAGGAAGAACGCGCCATTCAAGCAGAAGAGTCATTGAGAAAGACAAGGCACAATAATGCCATTgcatctgaacgtcttcagGAGGAATATAAATTACTTTCTGTTGAAATGTCACGCAAAGTTGAAGAGAACGAAAAGATGATCACGAAAGCAGTTGCAGAAGCTGATGAATTGCGGGACCACAACAGGCTTATGGAAGAAATGCTTCAGAAATGCAATCAAGAGCTCAGGCTTATATCAGATCAGCATGAATCGAAAGCGGAAGAGCTCTTGAAACAAATAagttcaaaagaaaaaacaattgaaCAGATGTCGCGAGAACTAGAAGCGAAGTCTAAAGAACTTGAGGATGCACTGAGGCATAGGGATGAAAAGGATGCTACATTTTCAAAGCAAGTTCAAATGCTTGAGATCCAACacaatgaaattaaacaaaGTTTGAAGAAAGAACAAGTGgacaaagaaaatatgaagaagCATATATCTCAATTAGAAGGAGAGCTTAAGAAAAAAGAAGCAGAATTAAGTGCTACGGAAAAGAAGCTCAAGATTAACAAAGGACGTGGTGCAGCTATGCATATGAATTTGACCTCAAGAGACAGTGAGGCTTCTAAGGCGAATGTTAAAAAGTCAAAATCAGAAATGCATAAGGGAATGGATGCTGCAAGCACTGCTATTAGCAAGTCTGGAGGAAGTGATGGTGAACGCCTTACAAAGGAATTATTGAATGAAGTCGCAGTCCTAAAGGAAAGGAACACCAATATGGAAACTGAACTGAAAGAAATGGAAGAAAGATATTCTGAGATAAGTCTGAAATTTGCAGAGGTAGAGGGAGAAAGACAACAACTTGTTATGACTGTACGGAATCTCAAGAATGGTAAGAAGAACTAG 2544 0.3746 MFKSWSKKNKIKAVFKLDFQATQVPKMKKSALMVSLVPDDVGKPTVKLEKTAVQDGTCLWENPIFESVKLVRDSKSGILHEKIYHFIVATGSSKSGYLGEASIDFADFLTETEPITVSLPLKFANSGVVLHVTIQNVEGYTAERNGEDNGAEGIYDDGSLKHQLSYASTDESYNLEENGNLAKSRSEYSEQNASNGISPAVASWDDPYSFRQNSMPPRGSVEVNATQNQVHKRSNTGWSMGSASDGSLGDWTNSPKERSQEPSGNATENLKSEIVSLKRQAELSELELQALRKQVEKESIRGQNLSRQINGLRDERDSFKTKYEQLRSQNNFNNNSNETKTSKNMKSDIDNTRIQLEAIKEELVYEKETSANLQLQLQKTHNSNSELLLAVTDLEEMLEQKNKEIRDLSSKEHDDDTELDLLRQKIAEQNREIDNCVKQREELSELIKELTLEYDILKNENADISLRLKQDEAQHIRLQNEHSASLVTIQQLETQVKRLEEKIEMQEDEFSLSSVSIKELENQVKALEKELKLQADKFEDDIHAMQSAKSEQEERAIQAEESLRKTRHNNAIASERLQEEYKLLSVEMSRKVEENEKMITKAVAEADELRDHNRLMEEMLQKCNQELRLISDQHESKAEELLKQISSKEKTIEQMSRELEAKSKELEDALRHRDEKDATFSKQVQMLEIQHNEIKQSLKKEQVDKENMKKHISQLEGELKKKEAELSATEKKLKINKGRGAAMHMNLTSRDSEASKANVKKSKSEMHKGMDAASTAISKSGGSDGERLTKELLNEVAVLKERNTNMETELKEMEERYSEISLKFAEVEGERQQLVMTVRNLKNGKKN 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04438 847 MobiDBLite consensus disorder prediction 763 786 - -
Tsu01g04438 847 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 7 135 IPR019448 -
Tsu01g04438 847 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 1 689 - -
Tsu01g04438 847 Coils Coil 574 676 - -
Tsu01g04438 847 Coils Coil 419 474 - -
Tsu01g04438 847 MobiDBLite consensus disorder prediction 167 269 - -
Tsu01g04438 847 Coils Coil 267 329 - -
Tsu01g04438 847 Coils Coil 342 362 - -
Tsu01g04438 847 Coils Coil 482 569 - -
Tsu01g04438 847 Coils Coil 698 739 - -
Tsu01g04438 847 ProSiteProfiles C2 NT-type domain profile. 3 138 IPR019448 -
Tsu01g04438 847 PANTHER BNAC08G20130D PROTEIN 687 847 - -
Tsu01g04438 847 Coils Coil 789 830 - -
Tsu01g04438 847 PANTHER BNAC08G20130D PROTEIN 1 689 - -
Tsu01g04438 847 Coils Coil 384 414 - -
Tsu01g04438 847 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 687 847 - -
Tsu01g04438 847 MobiDBLite consensus disorder prediction 167 199 - -
Tsu01g04438 847 MobiDBLite consensus disorder prediction 207 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04438 Tsu-Chr1 52088482 52093144 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04438 - - cam:101499984 1248.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04438 01 52088482 52093144 Tsu01g04438 01 52088482 52093144 ECH