Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04437 ATGGATTCAAAAGTTGTTCATAGTCATGTGCAAGAGGAGAATGATGAACAAAACTCACAATACGTTGAATCACGACAAGTGACACATGGTGTAGAAGAGAATCAATCTTCTGATCATGAGAAGAAGTCTGTTCTGAATAAGGTGAAGGCAAAGGCTAAGAAAATTAAGGACACAATAAAGAAGCATGGTCAACAAGTACTTGATACTGGTAATGGACATAACAATGAAAATCAGCATACTTCTAATGATGATGGTGACTTGGATGAGGATAAAGAAATCGTTCAAGACCGAGAAGTTCATCAAGTACCAATTTATGACAGTGAAGATGTTAAAAGTGCTACACCTACACCTGAATCTGAGAAAGTTGAAAATTTAGGAAATTCAGGAATTGATATTGAAGATACAAAAGTTAAGGGAGAAGAAGCATATCATGATACACCAGTTGAAGGTGATTCTTCAAACACTGAAATCAATCAAAACATAGCCAATGACCAGGCCAAATCATTTCCTGTGGAAGAGAAGCCTGAGCAATACAAGCCCAATTTGGAGAAGCCAGTAACAGTCTTGGAGGAATATCCTCAAAAACAAGGAATTAAAACTGAGGAATATACTCTTCCAAATTATCAAATCAATCATACTGATCCAAGTGTTGCAgAAAATGATGAAATCAAAGACAATATTAAACCACTTGAGGAATCTCTTGAGAGATTAAATGTGCATGATGAGTCAAAACCTACCACAGAACAAAAAATCCAGCCATCTGTTGCTGCTGCTGACATTGAATACCCTCCTGCTGTTGGAAGCCATGATCAGTTTGTGCCACACCTCTCTGATGCAACAAAAACTCAGAATGAATATCCCCAAGAAAGAACATCCATTGATATCAATAGAGACTTGGAAATTCCCTCAGAAACTAGAGAAGCTTTCAACAACATCACAACCACTGCTGATATACAACCTGGTTATGAAAAATCAGTGGAGACACAACCAAAGCACAAAAGTTACACAGATgaaattgaaatctcaactgCAGAAGAAGTTGATACATCTATCCATCCTGAAGATGATGAAATTTCTAAGCTTGGTATTGATGAGAAAGGTGATGAACAAAAAAGTGAGAATGGAAAGAACATTGGTTATTCTCTTACTGAGAAATTAACTCCAGTTTATGGAAAGGTTGCTGAAGTAGGAAATGCAGTGAAATCCAAAGTTTATGGAACTAATGATGGAAGTGAAACAAAAAATGGGGACAAAGGGGTCACTGTGAAGGATTACTTGGCCGAGAAGCTAAAGCCTAGTGAAGAAGATAAGGCACTTTCTGAGGTGATTTCGGAAGCTTTGCATAAAGGGAAAGAAGATCCACTGAAGAAAGAGGATGGAAAAGTGGATAGTGAAGTTGAGAAGTCTGAGAAAGTGTTTGAAGAGAGCAATGTGAATAATCCAGGAAAAGGTGTAGTTGGCAAGGTTAAGGATGTTGTTGGCTCTTGGTTTGTAAAGTCACCACAAGGTGGAGGAAGTGGTGAAGACTTATCAGAGAATAAAAAATCTGTTGAAGAAGTGGAACAAGTTGGCCAAGTTGTGGATGAAGGAGGAAAACAAGAGTAA 1605 0.3738 MDSKVVHSHVQEENDEQNSQYVESRQVTHGVEENQSSDHEKKSVLNKVKAKAKKIKDTIKKHGQQVLDTGNGHNNENQHTSNDDGDLDEDKEIVQDREVHQVPIYDSEDVKSATPTPESEKVENLGNSGIDIEDTKVKGEEAYHDTPVEGDSSNTEINQNIANDQAKSFPVEEKPEQYKPNLEKPVTVLEEYPQKQGIKTEEYTLPNYQINHTDPSVAENDEIKDNIKPLEESLERLNVHDESKPTTEQKIQPSVAAADIEYPPAVGSHDQFVPHLSDATKTQNEYPQERTSIDINRDLEIPSETREAFNNITTTADIQPGYEKSVETQPKHKSYTDEIEISTAEEVDTSIHPEDDEISKLGIDEKGDEQKSENGKNIGYSLTEKLTPVYGKVAEVGNAVKSKVYGTNDGSETKNGDKGVTVKDYLAEKLKPSEEDKALSEVISEALHKGKEDPLKKEDGKVDSEVEKSEKVFEESNVNNPGKGVVGKVKDVVGSWFVKSPQGGGSGEDLSENKKSVEEVEQVGQVVDEGGKQE 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04437 534 MobiDBLite consensus disorder prediction 133 147 - -
Tsu01g04437 534 MobiDBLite consensus disorder prediction 448 485 - -
Tsu01g04437 534 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 1 528 IPR037491 GO:0009737
Tsu01g04437 534 Coils Coil 45 65 - -
Tsu01g04437 534 MobiDBLite consensus disorder prediction 311 380 - -
Tsu01g04437 534 MobiDBLite consensus disorder prediction 79 105 - -
Tsu01g04437 534 MobiDBLite consensus disorder prediction 1 188 - -
Tsu01g04437 534 MobiDBLite consensus disorder prediction 64 78 - -
Tsu01g04437 534 MobiDBLite consensus disorder prediction 1 19 - -
Tsu01g04437 534 MobiDBLite consensus disorder prediction 448 474 - -
Tsu01g04437 534 PANTHER - 1 528 - -
Tsu01g04437 534 MobiDBLite consensus disorder prediction 326 373 - -
Tsu01g04437 534 MobiDBLite consensus disorder prediction 497 534 - -
Tsu01g04437 534 MobiDBLite consensus disorder prediction 148 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04437 Tsu-Chr1 52084194 52086631 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04437 - - cam:101500742 510.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04437 01 52084194 52086631 Tsu01g04437 01 52084194 52086631 ECH