Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04408 ATGCATAACCAACACACATTCATGCGTTTGCGCACACTTCCTTCTCCATTTCTCATCAATCATCACCGCCACACTAAGCCAAATCTCTTCCCAAGACCCAATTGCCCTCTCTCCATTCCCAAACCAATGCTTTGCTCTTCCTTTACTTCTTCTCATtccggtggtggtggtgttgatgACGACGGcggaaacaacaacaacaacactaaTGGTACTGCTTCTTCCCGCAACTTTAAGCAGCTCAATCAATCCACTTTTTTAGCTTCTCTTATGCCCAAAACGGAAATTGGCGTCGATCGTTTCCTCCATTCTTATCCTCACTATGATGGACGTGGTGTTCTCATCGCTATTTTCGATTCCGGTGTAGATCCAGCTGCTGCCGGTTTACAGGTTACCTCAGATGGGAAACCAAAAATTCTTGATATCCTTGATTGCACTGGAAGTGGAGATATTGATACGTCAAAAGTGGTGAAGGCTGATGCTGATGGATGTATTTCTGGGGCATCGGGTGCTTCTTTGGCTATCAATACTTCATGGAAAAACCCTTCTGGTGAATGGCATGTGGGTTATAAATTGGTTTACGAGCTTTTTACAGAAACATTGACCTCTCGTTTGAAGaaagaaagaaagaaaaagtggGATGAGATAAACCAGGAGGAAATTGCCAAGACTCTAAAACAACTTAATGATTTTGATCTGCAACACCGCAAGGTCGATGATGCTAAACTCAAAAAGGCTCGTGAAGATCTCCAGAATAGaattgattttcttaaaaagcAATCTGAGggcTATAATGATAAAGGGCCGGCCATAGATGCTGTTGTCTGGAATGATGGAGAGGTTTGGAGGGTTGCCCTTGATACACAGAGTCTTGAGGATGATTCAGATTGTGGGAAGCTTGCTAACTTTGTACCTTTAACTAATTATAGGACTGAGAGGAAATATGGTGTCTTCAGCAAATTAGATGCCTGTACATTTGTAGTGAATGTCTATAATGATGGGAATGTCTTAAGTCTTGTAACAGACTGCTCTCCTCATGGCACCCACGTTGCTGGTATAGCTACTGCATTCCACCCAGAGGAGCCTCTGTTGAATGGAGTTGCGCCCGGAGCACAATTAATATCTTGTAAAATTGGAGACGCTCGCTTAGGTTCATTGGAAACTGGAACTGGTTTGACTCGGGCACTGATAGCTGCTGTGGAGCATAAATGCGACCTTATCAACATGAGTTATGGGGAGCCAACATTGTTGCCAGACTATGGACGCTTTGTTGACCTTGTGAATGAAGTGGTAAACAAGCACCGTCTGATATTTGTAAGCAGTGCTGGTAATAGTGGGCCAGCACTAAGCACTGTTGGTGCACCTGGTGGTACCTCTTCAAGTATCATAGGAGTCGGCGCTTATGTTTCTCCTGCTATGGCAGCTGGTGCTCATTCTGTTGTTGAACCTCCATCTGAGGGGCTTGAATACACATGGTCTAGCCGAGGGCCAACGACTGATGGAGACCTTGGTGTCTCTATAAGTGCTCCTGGTGGTGCTATCGCTCCTGTTCCTACATGGACCCTTCAACGGCGCATGCTCATGAACGGCACATCAATGTCATCTCCATCAGCCTGTGGGGGAATTGCATTGCTCTTAAGTGCAATGAAGGCTGAGGGAATTCCTGTGAGTCCATATAGTGTGAGGAAGGCCCTGGAGAATACAACTGTTCCAATTGGTGATTCACCGGAGGATAAATTATCTACTGGGCAAGGGCTTATGCAAGTTGACAAgtgttatgaatatttacaGCAGTCCCAAAATATTCCATGTGTTTGGTAtcaaataaacataaagcaatCTGGAAAGACAAATCCTTCATCACGGGGCATCTACCTCAGAGAGGCTAATGCTTGCCGACAATCAACTGAGTGGACAGTGCAAGTTGATCCTAAATTTCATGAAGACGCTGACAAGTTTGAAGATTTGGTTGTATTTGAGGAGTGTATTGAGTTACACTCTTCAGACAACACAGTTGTGAAAGCTCCCGAGTATCTACTGCTCACTCATAATGGTCGTACATTCAACATATTAGTGGATCCTTCCAATTTATGTGATGGTCTACATTATTATGAGGTCTACGGTATTGACTGCAAAGCACCTTGGCGTGGTCCTCTTTTCAGAATTCCAATTACTATAACCAAGCCTGTGGCTGTAATTAATAGAACTCCACAAGTTTCGTTTTCAGAGATGTTATTCCAGCCAGGCCATATAGAAAGGAAATATATAGAAGTGCCACATGGTGCATCTTGGGTTGAAGCAACCATGAACATATCAAGTTTTGATACACCTCGAAGATTTTTTGTGGATACAGTTCAGATATGTCCATTACAAAGCCCTTTGAAATGGAGGAGTGTTGTAACTTTTTCTTCTCCTGCTGCTAAAAACTTCACCTTTAGGGTAGTAGGTGGTCAGACATTGGAACTAGTCATAGCTCAGTTTTGGTCAAGTGGAATAGGGAGTCATGAGACTACCAATGTGGATCTTAAGATTGTATTTCATGGTATAAAAGCTAGTCAAGAGGAAATTGTACTTGATGGGAGTGAAGCACCTGTCAGAGTTGATGCTGAAGCACTACTAGCATCTGAGAAACTTACACCTGTAGCTAATCTAAAAAAGATAAGAGTCCCATATCGACCTGTAGATGCTAAGATTAGTGCACTTTCAAATGATCGTGACAGACTCCCCTCTGGAAAGCAGATGCTAGCATTGACATTAACATACAAGGTCAAATTGGATGACGGAGCTGAAATAAAACCTCGAATACCATTTCTAAATGGTCGGATATATGATACTAAATTTGAGTCTCAGTTTTATATGATTTCCGATTCAAATAAGCGAATTTATTCAAGTGGAGACGCCTATCCAACCTCTACAAAACTCCCCAAAGGAGAATACAATTTACAGCTATATGTAAGGCACGAAAACTTGCAGATTTTGGAAAAGATGAAGCATCTGGTGTTATTCATTGAGCGAACTTTAGAAGAGAAGGATATCATTCGGTTAAGCTTTTTCTCTCGGCCAGATGGCCCACTAATAGGAAATGGTTCCTTTAAGTCCTCAACATTAATTCCAGGTATAAAAGAAGGATTTTATCTTGGTCCGCCAGCAAAAGACAAGCTTCCCAAGAACTCTCTACAAGGATCTGTATTGGTCGGATCAATATCATATGGACAACTATCATTTTCCGGACAAGGGGATCATAAAAATCCTAAGAAGCACCCTGCATCATATCGAATTTCTTATATAGTTCCCCCAAATAAGATTGATGAGGACAAGGGAAAAAATTCTTCTCCATCGTCCAAGAAGACTGTTTCTGAACGTTTAGAAGAAGAGGTGCGAGATACAAAAATTAAAGTTCTTGGAGGCATAAAACAAGAAAGTGATGAAGATCTCTTAGAATGGAACAAGTTGGCTGCCTTGCTCAAGTTGGAATATCCAAAGTACACTTTGTTGCTTGCAAAGATTTTGGAAGGCTTGGTTTCTAGGAGTAATATCAAAGACAAATTTCATCATAATGAAGAGATAATTAATGCAGCAAATGAGGTGGTCGACAGTATTGATAGAGAAGAGTTGGCAAAAATTTTGGCACTGAAAATTGATCAGGACGATGAGGAAGCAGAGAAAACCAAGAAAAAGATGGAATCGACCCGGGACCAGTTAGCAGAGGCACTTTACCAGAAGGGGCTTGCACTGGCAGAAATTGAGTCTTTAAAGGAGGTAGGTAACTCCCAGGCTTCGGCTGCAACAGAAGGTGCAGAACCCGACGAGCAATCAAAGGATGATGGCATTAATCCAGATTTGTTTGACGAGAACTTTAAGGAACTGAAGAAATGGGTTGATGTTAAGTGCACAAAGTATGGGATCCTGTTGGTGAAACACGAGAGGCGTAGTCAAAGGGTTGGGACAGCATTGAAGGTACTAACTGACATAATTCAAAATGATACCGAGCCTGCCAAGGAGAAACTGTATGAACTAAAGATCTCTTTGCTTGAAGAAGTCGGATGGACTCATTTAGCTACCTATGAGAGACAGTGGATGATTGTGCGTTTTCCCCCTAGCTTGCCACTTTTCTAG 4116 0.4113 MHNQHTFMRLRTLPSPFLINHHRHTKPNLFPRPNCPLSIPKPMLCSSFTSSHSGGGGVDDDGGNNNNNTNGTASSRNFKQLNQSTFLASLMPKTEIGVDRFLHSYPHYDGRGVLIAIFDSGVDPAAAGLQVTSDGKPKILDILDCTGSGDIDTSKVVKADADGCISGASGASLAINTSWKNPSGEWHVGYKLVYELFTETLTSRLKKERKKKWDEINQEEIAKTLKQLNDFDLQHRKVDDAKLKKAREDLQNRIDFLKKQSEGYNDKGPAIDAVVWNDGEVWRVALDTQSLEDDSDCGKLANFVPLTNYRTERKYGVFSKLDACTFVVNVYNDGNVLSLVTDCSPHGTHVAGIATAFHPEEPLLNGVAPGAQLISCKIGDARLGSLETGTGLTRALIAAVEHKCDLINMSYGEPTLLPDYGRFVDLVNEVVNKHRLIFVSSAGNSGPALSTVGAPGGTSSSIIGVGAYVSPAMAAGAHSVVEPPSEGLEYTWSSRGPTTDGDLGVSISAPGGAIAPVPTWTLQRRMLMNGTSMSSPSACGGIALLLSAMKAEGIPVSPYSVRKALENTTVPIGDSPEDKLSTGQGLMQVDKCYEYLQQSQNIPCVWYQINIKQSGKTNPSSRGIYLREANACRQSTEWTVQVDPKFHEDADKFEDLVVFEECIELHSSDNTVVKAPEYLLLTHNGRTFNILVDPSNLCDGLHYYEVYGIDCKAPWRGPLFRIPITITKPVAVINRTPQVSFSEMLFQPGHIERKYIEVPHGASWVEATMNISSFDTPRRFFVDTVQICPLQSPLKWRSVVTFSSPAAKNFTFRVVGGQTLELVIAQFWSSGIGSHETTNVDLKIVFHGIKASQEEIVLDGSEAPVRVDAEALLASEKLTPVANLKKIRVPYRPVDAKISALSNDRDRLPSGKQMLALTLTYKVKLDDGAEIKPRIPFLNGRIYDTKFESQFYMISDSNKRIYSSGDAYPTSTKLPKGEYNLQLYVRHENLQILEKMKHLVLFIERTLEEKDIIRLSFFSRPDGPLIGNGSFKSSTLIPGIKEGFYLGPPAKDKLPKNSLQGSVLVGSISYGQLSFSGQGDHKNPKKHPASYRISYIVPPNKIDEDKGKNSSPSSKKTVSERLEEEVRDTKIKVLGGIKQESDEDLLEWNKLAALLKLEYPKYTLLLAKILEGLVSRSNIKDKFHHNEEIINAANEVVDSIDREELAKILALKIDQDDEEAEKTKKKMESTRDQLAEALYQKGLALAEIESLKEVGNSQASAATEGAEPDEQSKDDGINPDLFDENFKELKKWVDVKCTKYGILLVKHERRSQRVGTALKVLTDIIQNDTEPAKEKLYELKISLLEEVGWTHLATYERQWMIVRFPPSLPLF 1371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04408 1371 Gene3D - 606 740 - -
Tsu01g04408 1371 MobiDBLite consensus disorder prediction 1256 1278 - -
Tsu01g04408 1371 ProSiteProfiles Serine proteases, subtilase domain profile. 95 593 - -
Tsu01g04408 1371 MobiDBLite consensus disorder prediction 1100 1122 - -
Tsu01g04408 1371 CDD Peptidases_S8_Tripeptidyl_Aminopeptidase_II 90 572 IPR034051 GO:0006508|GO:0008240
Tsu01g04408 1371 MobiDBLite consensus disorder prediction 50 77 - -
Tsu01g04408 1371 Gene3D - 1116 1371 - -
Tsu01g04408 1371 Gene3D - 208 266 - -
Tsu01g04408 1371 Gene3D Peptidase S8/S53 domain 271 604 IPR036852 GO:0004252|GO:0006508
Tsu01g04408 1371 Gene3D Peptidase S8/S53 domain 93 187 IPR036852 GO:0004252|GO:0006508
Tsu01g04408 1371 SUPERFAMILY Subtilisin-like 96 603 IPR036852 GO:0004252|GO:0006508
Tsu01g04408 1371 PANTHER TRIPEPTIDYL PEPTIDASE II 60 1267 - -
Tsu01g04408 1371 Pfam Subtilase family 110 572 IPR000209 GO:0006508|GO:0008236
Tsu01g04408 1371 Coils Coil 1213 1240 - -
Tsu01g04408 1371 ProSitePatterns Serine proteases, subtilase family, histidine active site. 346 356 IPR022398 -
Tsu01g04408 1371 PANTHER PEPTIDASE S8 60 1267 - -
Tsu01g04408 1371 Pfam Tripeptidyl peptidase II 873 1057 IPR022229 -
Tsu01g04408 1371 ProSitePatterns Serine proteases, subtilase family, serine active site. 530 540 IPR023828 -
Tsu01g04408 1371 Coils Coil 240 267 - -
Tsu01g04408 1371 PRINTS Subtilisin serine protease family (S8) signature 342 355 IPR015500 -
Tsu01g04408 1371 PRINTS Subtilisin serine protease family (S8) signature 529 545 IPR015500 -
Tsu01g04408 1371 PRINTS Subtilisin serine protease family (S8) signature 110 129 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04408 Tsu-Chr1 51876542 51893288 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04408 K01280 - gmx:100787184 2267.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04408 01 51876542 51893288 Tsu01g04408 01 51876542 51893288 ECH