Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04405 ATGGAATCCCTTTGGAGACTTCTGTATTTGCTAGAGCCTGCGCCTTTCACACTAATTGCCACAGCTGTAGCTGTGACATTTGGATCAGCTTTTCGAGCTCTAAATTATGGGAAGGAAATGGAGCGTAATCGCGATATGTCAGAAGCATCAATTACATTGGATAGGTCCCAAGCGTTGATGATTCCAGTTATGAGCTCTTTTAGCTTGGTTCTGATGTTCTACTTGTTCTCATCAGTCTCGCAGTTTCTCACAGCATTCACTGCCATTGCTGCTGCATCGTCCCTTTTCTTCTGTCTGTCTCCTTACGCTGCTTATTTGAAGTCACATTTTGGTTTGGCGGATCCTTTTGTTTCACGCTGTTGCTCAAAATCCTTTACACGAATCCAAGGAATACTATTGTTTACATGCTCTTTTACAGTGGTTGCTTGGCTTGTTTCTGGCCATTGGATACTGAACAATCTGTTAGGCATATCTATATGCATTGCATTTGTAAGCCATGTGCGTCTTCCAAACATCAAGATTTGTGCAATGCTCCTCCTTTGTCTATTTGTATATGACATTTTCTGGGTTTTCTACTCTGAAAGATTTTTCGGGGCAAATGTCATGGTAACAGTGGCAACACAGCAAGCATCAAATCCTATGCACACAGTTGCTAGTAGTTTAAGTCTTCCTGGGTTGCAACTAATAACAAAGAAATTGGAGTTACCTGTAAAGATTGTCTTTCCAAGAAATTTGTTGGGCGGTGTTGTTCCAGGACAGAGTGCATCGGACTTTATGATGCTAGGTTTAGGGGACATGGCTATCCCGGGCATGTTCCTGGCTTTGGTCCTCTGCTTTGATTATCGCAGGAGCAGGGATACCATAAATCTCACTGAGTTACATTCTTCAAAGGGGCACAAATACATATGGTATGCGCTGCCTGGATATGCCATTGGTCTGATAACTGCTTTGGCAGCTGGTGTCTTGACTCACTCACCTCAACCTGCACTCCTTTATCTGGTGCCTTCTACCTTGGGACCTGTAATTGTGATCTCTTGGATGAAAAATGAGTTACTTGAGTTGTGGGAAGGGAACATTCCAAATTTCAATGATAAGGACCGCGAAGTAGAAGTTTAG 1116 0.4292 MESLWRLLYLLEPAPFTLIATAVAVTFGSAFRALNYGKEMERNRDMSEASITLDRSQALMIPVMSSFSLVLMFYLFSSVSQFLTAFTAIAAASSLFFCLSPYAAYLKSHFGLADPFVSRCCSKSFTRIQGILLFTCSFTVVAWLVSGHWILNNLLGISICIAFVSHVRLPNIKICAMLLLCLFVYDIFWVFYSERFFGANVMVTVATQQASNPMHTVASSLSLPGLQLITKKLELPVKIVFPRNLLGGVVPGQSASDFMMLGLGDMAIPGMFLALVLCFDYRRSRDTINLTELHSSKGHKYIWYALPGYAIGLITALAAGVLTHSPQPALLYLVPSTLGPVIVISWMKNELLELWEGNIPNFNDKDREVEV 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04405 371 PANTHER SIGNAL PEPTIDE PEPTIDASE-LIKE 3 4 358 - -
Tsu01g04405 371 Pfam Signal peptide peptidase 49 358 IPR007369 GO:0004190|GO:0016021
Tsu01g04405 371 PANTHER SIGNAL PEPTIDE PEPTIDASE 4 358 IPR007369 GO:0004190|GO:0016021
Tsu01g04405 371 SMART psh_8 49 348 IPR006639 GO:0004190|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04405 Tsu-Chr1 51850319 51855113 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04405 K09598 - gmx:100794976 687.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04405 01 51850319 51855113 Tsu01g04405 01 51850319 51855113 ECH