Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04389 ATGAAGAACAAATTGGTTCAGCGTATAAACAAGTTGCTTTCATCTTCTGTTTGCAGATCTAGCTCTCCAAATCATCAAACACATGTGGACGTTCGTGAAGAATATGCTAATGCATTTCGTACGGAATCATACATAGAGTTTTGGACGCGCGTGGTTGCATATTCCAATGGTGAATGTCGTTCTCGTTTGTCAAGAGAAACCACCACATCGACCCGTCTTCCCTCTTACCGTTTATTCGCTGAACATCTCTTGGATCCTGATCAGCCGACGGTTACTCGAATCTTGGCCCAAACCAAACTTCAACCCGAAATCAACTCTCTCTTATCGGACTATTTTTCGCACACCGCTAATGCCTCTCTACTTTGTAGCCAATTGTTAAAGGACATTGACGGCGTCcgtataaaatataaatcacaTAAAACCATTCTTCAATTGGTCGCTACTATTAAAGAAGGATCTAATCAAATTTCTTCTTTAATGATAGCGACCCATTTAATTGAGCTTTCATTAGGTCAATGCTCTGAATTACAAAAACAACTTGAGTTAAGTCGTGATAACTTGCGAGCCAAGCTTCAAATGGTTACTATACTTAAACATTGTTCAACTTGTGCTATTGTGGTAGTAACAACTTCTCTTGTTGTGTTAGTTGTGTCTCATGGCTTTGCATTGCTCGTGGCTATGCCGGGGCTAACTTTGTTGAATTTGCAATCAAAGAGGAAGCTAACTAACGCAACAGCTCAGCTCGACGCAGCCGCCAAAGGAACATATATATTGAACAAAGACTTGGAAACAACTAGTCGGCTCGTGGCTCGGCTAAATGATGAGATGGAGCATATAAGGAAAATGGTTAAGTTTTGGCTTGAAAGGAAAGAGGATAAAATTCAAGCTGATGGGGAAGTGTTGCGCCTATTGAAGAAGAACCAATGCAATTTTAGTGATCAATTGGATGAGTTGGAGGAACATTTGTATTTGTGTTTCATGACTATTAATAGGGCTAGAGATCTTGTGTTGAACCAGATTACTGCTTCAGCTTGA 1035 0.3981 MKNKLVQRINKLLSSSVCRSSSPNHQTHVDVREEYANAFRTESYIEFWTRVVAYSNGECRSRLSRETTTSTRLPSYRLFAEHLLDPDQPTVTRILAQTKLQPEINSLLSDYFSHTANASLLCSQLLKDIDGVRIKYKSHKTILQLVATIKEGSNQISSLMIATHLIELSLGQCSELQKQLELSRDNLRAKLQMVTILKHCSTCAIVVVTTSLVVLVVSHGFALLVAMPGLTLLNLQSKRKLTNATAQLDAAAKGTYILNKDLETTSRLVARLNDEMEHIRKMVKFWLERKEDKIQADGEVLRLLKKNQCNFSDQLDELEEHLYLCFMTINRARDLVLNQITASA 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04389 344 Coils Coil 262 282 - -
Tsu01g04389 344 PANTHER UPF0496 PROTEIN 3 1 342 - -
Tsu01g04389 344 Pfam Protein of unknown function (DUF677) 172 340 IPR007749 -
Tsu01g04389 344 PANTHER UPF0496 PROTEIN 3-RELATED 1 342 IPR007749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04389 Tsu-Chr1 51749704 51750997 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04389 - - mtr:MTR_1g100200 514.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04389 01 51749704 51750997 Tsu01g04389 01 51749704 51750997 ECH