Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04385 ATGGACTTAGAGTTGAATAGAGGTGTTTCTCCAACACTAAAGATTTTTCAAAATGGGATATGGTGGTTCATAGTATTGATCAATCTTGGTTATATCATGATTTGGCTTATGATGCCTACAAATACCTTCTTTATGCATTGGTTACCTGATATTCAAGCCAAGGCAGATCCAATATACTTTGGCAAACAAGGAACAACCATACTCGTTTACACATTTCCCATAATATTTATAGCAACTTTGGCAAGTCTATACCATCATTTGATGCAAAAAGCTTCTAATCATAGCACTGAAAGCAAGATTGGATTCTTAAGAAAGGCATCATGGAGAAAACCATTGCTTGTAAATGGTCCTCTTGGGATTATCACAAAGACAGAGTTTTCTTTCATAATcatgtttgttttattattaatttggtcCTTGTGTTCCTACTTACATGGCATGTTTGTAAATGTGGCCCTACAAGCAGCTTATGAAAGAGAGCAAGTGTGGGAAGCCAAATTGAAAAATTCAGCACTAGCTTTAGGCTTTGTTGGGAACATTTGCTTAGCTTTTCTATTCTTTCCAGTTTCAAGAGGGTCTTCCATTTTGAGGTTCATTGGCCTAACTTCAGAAGCAAGTATCAAGTATCATATCTGGCTAGGATATATTGCAATGACAATGTTCACAGCTCATGGACTATGCTATGTTACTTTTTTTGAAAAGACACATCAAACCGCAGAGATATTCAAATGGAGCAAAGTTGGCATCTCAAATGTGGCAGGAGTAATAGCTCTGCTTGCTGGATTAACCATGTGGGCTACAACCTTACCTCTTATAAGGCGGAAATTTTTTGAGCTGTTCTTCTACATTCATCacttgtacattttttttgtagTCTTCTTTGTCCTACATGTAGGATTTTCCTATTCATGCATAATGCTCCCTGgattttacctttttttggTCGACCGATATCTTAGATTCCTACAGTCCCAGCAGAAAATTCAGTTGGTTTCTGCTCGCATTTTACCTTGTGAGGCTGTTGAGCTGAATTTCTCCAAGAATCCAGGATTGTTCTATGCTCCAACAAGTataattttcataaatattGCTACTATATCCAAGTTGCAATGGCACCCATTTTCAATCACCTCATGCAGTAATACTGATTCTGATACCTTAAGCATTGTCATCAAAACTACAGGAAAATGGTCCCATACATTGTTCCAGAAACTATCAACTTTTTCTCCACCGGCCCACCTCGATGTCTCCATTGAAGGGCCGTATGGACCAGCTTCAACTTTTTTCTCGAGATATGAAACGCTAGTGATGGTGAGTGGAGGAAGTGGCATTACTCCTTTCATCTCGATAATTCGTTCGCTACTCTATAAGGCCAACACCGAAGGCGGAAAATCTCCCAAAGTTCTTCTTATATGTTCCTTCAAGAAGTCCATTGATCTTACAATGATAGACCTCATCCTTCCTGTCTCAGGCACCGCCCTTGACACATCACGTCTGCAGCTTCAAATTGAAGCCTATGTAACAAGAGAGAAACAGCCAGCAACGACGAATGATAGAAAGCTTCTTCAAACATTATGGTTCAAGTCAAACGCATTAGACGAACCAATTTCCGCAGTCTTTGGACAGAACAGTTGGCTCTATCTTGGAATTATCATCACAACTTCCTTTATATTATTCCTTTTAATCATTGCCATCCTAACTAGATACTACATATATCCTATTGATCATAATTCTGATCTGATATACCCTTATTTCTTAAGGTCCATTCTTAGCATGTTGTTCGTATGCGTATCCATAGTCATTGCAGCTACATCTGTCTTTCTATGgaacaaaaaacataacaaGGCTTTGAAGCAGATTAAAAACACATCGACTCCAACAACTTCGCCAGGCTCAGTAAATCACAAAACTGATAGAGAATTAGAGAGTCTTCCCAACCAATCCTTTATCCAAACAGCTGAAATTCATTACGGCGAAAGGCCTGATATAAAGAAAATACTTTCTAACTGTGATGGATCAAGCATTGGAGTTCTTGTTAGTGGCCCAAGGAAAATGAGACATGAAGTAGCATCAATATGTACATCTTGTTCAATAGAAAACTTGCATTTTGAGTCCATTAGTTTCAGCTGGTGA 2133 0.3722 MDLELNRGVSPTLKIFQNGIWWFIVLINLGYIMIWLMMPTNTFFMHWLPDIQAKADPIYFGKQGTTILVYTFPIIFIATLASLYHHLMQKASNHSTESKIGFLRKASWRKPLLVNGPLGIITKTEFSFIIMFVLLLIWSLCSYLHGMFVNVALQAAYEREQVWEAKLKNSALALGFVGNICLAFLFFPVSRGSSILRFIGLTSEASIKYHIWLGYIAMTMFTAHGLCYVTFFEKTHQTAEIFKWSKVGISNVAGVIALLAGLTMWATTLPLIRRKFFELFFYIHHLYIFFVVFFVLHVGFSYSCIMLPGFYLFLVDRYLRFLQSQQKIQLVSARILPCEAVELNFSKNPGLFYAPTSIIFINIATISKLQWHPFSITSCSNTDSDTLSIVIKTTGKWSHTLFQKLSTFSPPAHLDVSIEGPYGPASTFFSRYETLVMVSGGSGITPFISIIRSLLYKANTEGGKSPKVLLICSFKKSIDLTMIDLILPVSGTALDTSRLQLQIEAYVTREKQPATTNDRKLLQTLWFKSNALDEPISAVFGQNSWLYLGIIITTSFILFLLIIAILTRYYIYPIDHNSDLIYPYFLRSILSMLFVCVSIVIAATSVFLWNKKHNKALKQIKNTSTPTTSPGSVNHKTDRELESLPNQSFIQTAEIHYGERPDIKKILSNCDGSSIGVLVSGPRKMRHEVASICTSCSIENLHFESISFSW 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04385 710 CDD NOX_Duox_like_FAD_NADP 330 509 - -
Tsu01g04385 710 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 416 490 IPR039261 -
Tsu01g04385 710 PANTHER NADPH OXIDASE 16 709 - -
Tsu01g04385 710 Pfam Ferric reductase NAD binding domain 432 693 IPR013121 GO:0016491
Tsu01g04385 710 Gene3D - 416 542 IPR039261 -
Tsu01g04385 710 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 323 431 IPR017927 GO:0016491
Tsu01g04385 710 SFLD Ferric reductase subgroup (FRE) 19 710 - -
Tsu01g04385 710 PANTHER FERRIC REDUCTION OXIDASE 4-LIKE 16 709 - -
Tsu01g04385 710 Gene3D - 598 710 IPR039261 -
Tsu01g04385 710 SFLD Ferric Reductase Domain 49 710 - -
Tsu01g04385 710 Pfam FAD-binding domain 328 426 IPR013112 GO:0016491
Tsu01g04385 710 SUPERFAMILY Riboflavin synthase domain-like 328 424 IPR017938 -
Tsu01g04385 710 Pfam Ferric reductase like transmembrane component 174 294 IPR013130 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04385 Tsu-Chr1 51703400 51706854 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04385 6 710 Miscellaneous Gene Families AT1G01580 50.694 0.0 724
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04385 K00521 - gmx:100779692 1077.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04385 01 51703400 51706854 Tsu01g04385 01 51703400 51706854 ECH