Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04379 ATGGCGAAAGTGACACTTCATGTGTACGACTTGACCAATGGATCGGAGAAGATGAACAGCACTGTTGTTCACATTAACAAGATCTTCAAGAATGGTATTGGTCTTGGTGGTATCTTCCACAGTGCTGTTCAGGTTTACGGAGATGATGAATGGTCATTTGGATTCTGTGAGGAAGGTACTGGAGTTTTTAGTTGCCCTTCAGGGAAGAATGCAATGTTTACCTATAGAAAATCCTTTGTTCTAGGGAAAACCAACTACAATATTTTCAAGGTCAATCAAATATTAAGAGAACTTCGTAGAGAGTGGCCTGGAAATTCTTATGATCTCTTCTCCAAAAACTGCAACCATTTCTGTGATGAATTTTGTCTAAGACTAGGTGTTCCAAAACCTCCAGGTTGGGTTAACAGGTTTGCTAATGTTGGTGATACTGCCATGGAAGTGGTCGGGAATACAGCATCACGATTCCGGCAAGCAAAAACAGAGATTGTATCAGCAAGCAAAGCAGCATACAGATTCCTGTTTTGTGTTGCAAATAATGTTAAAACTGATATGGATGATTCCCCTAGAAATTCAGATACAGGAGAATCTCCAAATAGAGTTCAAGCTGCTTTTGTTGAAAAGTGTTTTTACTAA 633 0.3934 MAKVTLHVYDLTNGSEKMNSTVVHINKIFKNGIGLGGIFHSAVQVYGDDEWSFGFCEEGTGVFSCPSGKNAMFTYRKSFVLGKTNYNIFKVNQILRELRREWPGNSYDLFSKNCNHFCDEFCLRLGVPKPPGWVNRFANVGDTAMEVVGNTASRFRQAKTEIVSASKAAYRFLFCVANNVKTDMDDSPRNSDTGESPNRVQAAFVEKCFY 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04379 210 Gene3D PPPDE domains 1 168 IPR042266 -
Tsu01g04379 210 Pfam PPPDE putative peptidase domain 3 144 IPR008580 GO:0008233
Tsu01g04379 210 ProSiteProfiles PPPDE domain profile. 2 147 IPR008580 GO:0008233
Tsu01g04379 210 PANTHER EXPRESSED PROTEIN 1 201 - -
Tsu01g04379 210 SMART DUF862_2a 2 154 IPR008580 GO:0008233
Tsu01g04379 210 PANTHER DESUMOYLATING ISOPEPTIDASE 1 201 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04379 Tsu-Chr1 51625613 51626801 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04379 - - gmx:100786944 325.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04379 01 51625613 51626801 Tsu01g04379 01 51625613 51626801 ECH