Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04358 ATGGAGACTGAATCCTTCGTCGATAAGGTAGAAGAGAAGTTTCACGACAACAACTCCAGTTCAGATTCATATTCCGATTCTGACGATGATCACAACAAAAACATTCACTCCAAGAGGCCACCATTACCAGCCTCTAAAGCTAACTCTGTTTACCGTCTCCTCGGTCGCGATCGCCCCGTTCATATGGTCTTAGGCGGTGGAAAACCTGCGGATATTTTACTATGGAGGAACAAGAAATTAACGGGAATGGCACTTGGTGCTGGCACAGCCTTGTGGGTTTTCTTTGAGTTGATGGAATATCACCTCATAACTCTTATATGCCATTTATTGATTTTGTCTCTCGGGGCCCTTTTCTTGTGGACTAATGCATCTGTCTTTATCCATAAGTCTCCAATGCAAATCCCAAATATTTCGATTCCTCAGGAAAGCATTATTGAGGCTGTTACTGTTCTGAGAATTGAGATTAACCGAGGCTTCACTATTTTGCGGGAAATTGGAACTGGGAGAGATATTAGGAAGTTTCTTACCGTTGTTGGTGTATTGTGGGTTATCTCAGTCATTGGGAGCTGGTTCAATTTCTTGACATTGTTTTATCTATTCTATCTATCACTGTTTACATTGCCACTGGTGTATGAGAAAAACGAAGACCAGGTTGACGCACTAGCTGAGAAAGCAATGATCGAGATCAAGAAACAGTATGCAGTGCTTGATGCTAAGGTTTTGAGCCAGATACCGATCGCAGGAATGAAAAAGGATTAG 759 0.4216 METESFVDKVEEKFHDNNSSSDSYSDSDDDHNKNIHSKRPPLPASKANSVYRLLGRDRPVHMVLGGGKPADILLWRNKKLTGMALGAGTALWVFFELMEYHLITLICHLLILSLGALFLWTNASVFIHKSPMQIPNISIPQESIIEAVTVLRIEINRGFTILREIGTGRDIRKFLTVVGVLWVISVIGSWFNFLTLFYLFYLSLFTLPLVYEKNEDQVDALAEKAMIEIKKQYAVLDAKVLSQIPIAGMKKD 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04358 252 Pfam Reticulon 70 225 IPR003388 -
Tsu01g04358 252 ProSiteProfiles Reticulon domain profile. 69 252 IPR003388 -
Tsu01g04358 252 PANTHER RETICULON 2 250 IPR045064 GO:0009617
Tsu01g04358 252 PANTHER RETICULON-LIKE PROTEIN 2 250 - -
Tsu01g04358 252 MobiDBLite consensus disorder prediction 1 44 - -
Tsu01g04358 252 MobiDBLite consensus disorder prediction 1 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04358 Tsu-Chr1 51493282 51495483 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04358 - K20721 gmx:100790190 345.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01005 08 11062796 11065334 Tsu01g04358 01 51493282 51495483 ECH
Tsu02g00410 02 3430241 3433075 Tsu01g04358 01 51493282 51495483 ECH
Tsu01g04358 01 51493282 51495483 Tsu01g04358 01 51493282 51495483 ECH