Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04353 ATGTCCACCACCACAATTTCTTCTTCACTCCCTTTCTCTCTCCCAATCAGCCGCCACAATTCTAGGGTTTCTCTTTTCAATCCAATCTCTTCTCGCACCATTTCATTCCAATCATCCCAATCATCATTCACCTTATCTACAAAAAAATGGAGAGTTTTGTGTTTTAGGAACAAAAACAATTCATCGGAGACTAATGACTCCGAGTTCAAAGAAGATAAATTATCAGATGATTTTGTGGAGTTTAAAGAGGACCAGTCCAAAGATTGGCTTGCTTCTCTTTATATGATCATAAATACAGTTCTTCATGTTGAGCCTTGGAAAGTTCCTTGGACAGCAAAGACCATTGTTCAGGTTATGCTCCTCTGGATTGCCTCATTCTGGTTAGTAGGTTCTTGGATAGTGCCATTTTTAGCTTACACAGCAGGGTTTAGAAAGGAAACTCTTTCATACAGAGGACAAGCATTGTACAGCCTCTTGACAGATGTTGCCGAAGGTGTGGTTGGGATAGCAATACTTCATCGCTGTCTTGAAAAGTTTAAACCACTCTCATCTGACTGGTTCAAATTTGAACTCAAGGGGAAGTGGCAGTTTGATGTCGGTTTAGGCTGTCTCATGTTCCCCCTCATCAATCATCTGTCACAAATGAACCTAAATTTGTGGCCTGTTCTTCAATATGCTCCAGTTACGGTCTCCAGTGTAGAGCAATCCATTGTAGCAAGAGACCCTGTGGCAATGGCCCTCTATGCAGTGGTAGTTACAGTTTGTGCCCCAATATGGGAGGAGATTGTCTTTCGTGGTTTCCTTCTCCCATCTTTAACCAGGTACATGCCTGTGTGGAGTGCAGTATTAGTTAGCTCAGTAGCATTTGCCTTCGCACATTTTAACATTCAAAGGATGCTGCCCCTTGTATTTCTTGGCTTGGTTATGGGTGCTATCTTTGTACGATCTAGGAACCTCTTGCCATCAATGTTGTTGCATAGTTTGTGGAATGCTTTTGTATTTCTTGATCTCatgaaataa 1020 0.4157 MSTTTISSSLPFSLPISRHNSRVSLFNPISSRTISFQSSQSSFTLSTKKWRVLCFRNKNNSSETNDSEFKEDKLSDDFVEFKEDQSKDWLASLYMIINTVLHVEPWKVPWTAKTIVQVMLLWIASFWLVGSWIVPFLAYTAGFRKETLSYRGQALYSLLTDVAEGVVGIAILHRCLEKFKPLSSDWFKFELKGKWQFDVGLGCLMFPLINHLSQMNLNLWPVLQYAPVTVSSVEQSIVARDPVAMALYAVVVTVCAPIWEEIVFRGFLLPSLTRYMPVWSAVLVSSVAFAFAHFNIQRMLPLVFLGLVMGAIFVRSRNLLPSMLLHSLWNAFVFLDLMK 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04353 339 Pfam Type II CAAX prenyl endopeptidase Rce1-like 246 331 IPR003675 GO:0004222|GO:0016020|GO:0071586
Tsu01g04353 339 PANTHER CAAX AMINO TERMINAL PROTEASE FAMILY PROTEIN 1 337 - -
Tsu01g04353 339 PANTHER CAAX AMINO TERMINAL PROTEASE 1 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04353 Tsu-Chr1 51454226 51457616 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04353 K07052 - gmx:100775964 508.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04353 01 51454226 51457616 Tsu01g04353 01 51454226 51457616 ECH