Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04348 ATGGACACCGACGGATTATCCCTAATCTGTAGCGGTCTTGGATCCAtcgaagaagatgatgaaggaaATCGAATCGGTTACTCCAAAGGCGAATACTGTCTCGATAATTTGAAAGATTTGTTGAGGTTTTTGAGACGTGATGACCCGCAAACACGTGATGTGTTCAAGCAAGTGTGTAAATGGAACATCGTTTCAAAGGATTTGGTACCAATTATTGAACACTATCATGAAGATCGTAGCACGCTTCTTAATGCagTTAAGGTTTTGGTGTTCCTTACAATGCCGATTGAGCCTGGTTCCACTGATATATCTCAGCAGTTGGAGTATCTGTGGGATTTGAAGTCTGCCGTGACTAACAGTGATGTCACTACCGTGATCGTGTCAATTCTAGAAAAACCACTTGAGAATTTGGAACTCAATGCATTCACCGAGGATGATTGGAAATTGGTACAGCTGGTGTTTACGTTATTTAGAAATATCCTTGCCGTTCAAGAAATTCCGTTGCATCAGAAATCAGCAGGATCTGCTAGTCATTTTTTAGCGCTGAGAGATAAATTTCTGGAACTTTTGTTCAGTGAGAATGTGATGGATATCATTTTGGTTGTATGTCAAAATGTTGGTAGTTCTAATGTTTATCTCCGTCAGGATAACTTGCTTCTATTGGAAATTTTCCATTATATTTTTATGGGTCAGGATCCAGAGTTGATTGTTCGGGGCCATTTGAATGGATCGAAGGTTGACAAAGACTCCCAAGCTTCTCTTGATAGTCTCCAGTCCATCATGgaggaagaaaagaagaaaagaattattAGCAGGCTTGGCAATATCAGTCGGCATTCACAATTTAGTGGAACATTTGCAAGGGTTACCATGGATGGTTCTAAAGCCGTAATGAAGGGAAATCCTAGTTCTTCTCATAATATGCATCttaaatcacaaaatattacaCGGGGTCGGGTCAAAAAAATTGCATGGGATCACCCAAGGTTGCCTTCAACAAAAGATAAGATCTTGGAGTTGCTTCGTGGATTTGTAGATCAGTTTCTTTCTGGGGCATACAACGTTTTGATGCGATCCGTCTGTGAAGATATTGTAAAGGAACATCCTTCAGTTCAAAATAGTGATGTCGTTGTTTTCTTTCAAGTGGCTGAATTTGTCACTTCATTTCAGTTTTACAAGTATTCAACTTCAAAGACCAAGGAAGACAAGGACACATTTGGTGATAATGATGCTGATGCTTCGGATTTCAGTGGTAAAATATGTGGCCCAGTTGAAGCATCCTTGAATGAGTCAATGTTTCAATTAGTCATTTCAAAGTGGCGGCAGGCCTATGATGGTCTAAAGGAGACCAATGACTACAAGTTTCTATCTGCAGCTGGTTCTCTTTTGAAAAACATGATTCGCATGCTGGATTTAGTACTTAAGTTGCTTCCAGAAGACTCTAAGGAGCCACAAACAGCTCGCATTCTTCTTTACAAGTTATTTTATGATCAGACTGAAGAAGGGATGACTCAATTCCTCTTGAATTTGATCAAAACGTTTGACACACACAAGCAATGCAAAAGTGATCTTGCAGATTTGGTTGAAATCATTTGCAAGGTTGTAAATCTAATGGATTATCTCCAGTCTCGAGGAACACTGAGGGTGTCAAAAAAAGCAAGGAAATTGAAAAAGAAGATTTCCAATGTAACAGAATCTGAGAATAAACCAACTGGAGATAATTCATGCATCCAAAAAGAAGCTGACATTTCTATTGACAATCAATTACCTGAAAATCAGTTGCTGCAGAAGGAATCCCTACCAAATGCAATTCCCACTGAGCAAGAAGACGTCCCTGATGATAATGATCATCAAAATCTCGAGAAAGATGTGAACTCCGAAGTTTGTTTGGAATCAATGGAAAACACAAATCTCGATGATAATGGACATGAAAATTTCAAGGAAGATGTGAACTCTGAAGTTGGTATGGAATCAGTGAAAAACACAAATCTTGATGATAATGAACATGAAAATGTTGAGGAAGATGTGAACTCCCAAATTGGTTCGgaaccaattaaaaagacaaaTCTTGAACATCCTAATGAGGATATGTTGGATGACACTGGTGATTTTTCTGAAGATGAGCAAATAAATGCAATTAGTGAAGTTGATTTCAACGTTTCAACGCTTGTCTCTGCCTTTGCAAATCACAGTATCATTCAGAAATTATGTTGGTTGCTCAAGTTTTATAAAAGCAATTCCCTTGCTATAAACCATTACATAATAAGCATGTTGAGGAGAATTAGTGATGAGCTTGAACTCCATCCCATGCTCTACCAGTTGTCGCTGCTCACAATTTTTTATGACATCCTTGTTGAACAAAAATCATGCCCCTGCGAGGAATATGCAACTATTGTTGATTTCCTGAACAGTTTGGTCCGAAAGATgctaaagaaaatgaaaaagcaGCCCCTCCTATTTGTTGAAGTCCTTTTCTGGAAGACCCGAAGGGAATGTCATTACATCAATGCAGAATATATGTTGGGTGAGCTTGGCcatttgaaaaatgaaagtaaaaattgGAATGATACTCAAGGAGATGAAGAAATTGGTTCATCCCCAGTGAAGGCGTGGACTCGTAGAAGCATAGCTGATGCACTTGGTGACGATGAAGCGGATGTTGTGATCTCTCATGACTCAAGATATCAAAAcTATGGAGAAAAGCTTGGTGATGTAGAAGGCTTTGCTTCTACCTCAGGCAGTAAGAATAGCGGAGATAATAATAATGGGGAGCCATGGTTGGAAGATGATTCTCAAACAGCTCcaaggaggaaaaaaaaacttattctaGATGCAGAATTGGAGATACAAATTAAGGATCTCTATGAGAAATTCAAAGATGACCGAAATTGCAGTCGACGTATTGCTGAAGTGCTAGATCCAGATGGTAAAATTTCTCCAGCTCAAATATccaataaattgaaaaaattagggCTAACAATTGCATCAAGGAAAAAGAAGGGTGAGGGTGAAACTTTTTCAACAAGCCctaatcaaaaaagaaaaagagtcaGTGCTTTCAATGAAGATCAGGAAGCTCTTATTAAAGTTCTATATGAGCAATTCAAGGACCATAGAAGATGTAGCTATATGATAGCCAATGCACTCGACGGGGATGGTAAATTCACACCTGCCCAAATCTCTCGAAAACTTAAGCAACTTGGTTTATTTGTTCCTCAAAAGAGTTTTAGAGGAAAAGACAACCAAAAGAATGAGGATCTTATGGATTATTCAGATGATAGAATGAATGAATCTGATGATGACACATTGATATCATTGATTGAAAGgaAAAAAGTGAAGAATAGAAAAGTATCAAGCAAACAGTTACAAGAACAGACTGGCgaggagaaattatcaaaagatGATTCTGATGATGAAATCCTCGGCTCTATCCTCAAGAAAAAAGTGAAGAATAGAAAAGAATCCAGTGAACAGTTACAAGAACAGACCGGTGAGGATAAGTTGTCAAAAGATGATTCTGATGATGAAATACTCGGCTCTATCCTCAAgaaaaaaaagaatagtttgGTATCCAGTGAACATTTACATGAAAACACCAATGCGGATGAATTGTCTAGAGATGATTCTGACGATGAAATGCTTCAATCTGCGCTGAATGAAAATCAAGTAGGATTTATGAGTTCCAAACAAGTAGAACATAAGCAAGTGGATCCTGACTTGGAAGATTCAGACGATGAAGTGGCTGTTAATGTACTTCCTGACAATGCTGTATCCAGAAGGAAGTTAAGAATGGTGATTGATCTTGAGGATGATGACTGA 3819 0.3645 MDTDGLSLICSGLGSIEEDDEGNRIGYSKGEYCLDNLKDLLRFLRRDDPQTRDVFKQVCKWNIVSKDLVPIIEHYHEDRSTLLNAVKVLVFLTMPIEPGSTDISQQLEYLWDLKSAVTNSDVTTVIVSILEKPLENLELNAFTEDDWKLVQLVFTLFRNILAVQEIPLHQKSAGSASHFLALRDKFLELLFSENVMDIILVVCQNVGSSNVYLRQDNLLLLEIFHYIFMGQDPELIVRGHLNGSKVDKDSQASLDSLQSIMEEEKKKRIISRLGNISRHSQFSGTFARVTMDGSKAVMKGNPSSSHNMHLKSQNITRGRVKKIAWDHPRLPSTKDKILELLRGFVDQFLSGAYNVLMRSVCEDIVKEHPSVQNSDVVVFFQVAEFVTSFQFYKYSTSKTKEDKDTFGDNDADASDFSGKICGPVEASLNESMFQLVISKWRQAYDGLKETNDYKFLSAAGSLLKNMIRMLDLVLKLLPEDSKEPQTARILLYKLFYDQTEEGMTQFLLNLIKTFDTHKQCKSDLADLVEIICKVVNLMDYLQSRGTLRVSKKARKLKKKISNVTESENKPTGDNSCIQKEADISIDNQLPENQLLQKESLPNAIPTEQEDVPDDNDHQNLEKDVNSEVCLESMENTNLDDNGHENFKEDVNSEVGMESVKNTNLDDNEHENVEEDVNSQIGSEPIKKTNLEHPNEDMLDDTGDFSEDEQINAISEVDFNVSTLVSAFANHSIIQKLCWLLKFYKSNSLAINHYIISMLRRISDELELHPMLYQLSLLTIFYDILVEQKSCPCEEYATIVDFLNSLVRKMLKKMKKQPLLFVEVLFWKTRRECHYINAEYMLGELGHLKNESKNWNDTQGDEEIGSSPVKAWTRRSIADALGDDEADVVISHDSRYQNYGEKLGDVEGFASTSGSKNSGDNNNGEPWLEDDSQTAPRRKKKLILDAELEIQIKDLYEKFKDDRNCSRRIAEVLDPDGKISPAQISNKLKKLGLTIASRKKKGEGETFSTSPNQKRKRVSAFNEDQEALIKVLYEQFKDHRRCSYMIANALDGDGKFTPAQISRKLKQLGLFVPQKSFRGKDNQKNEDLMDYSDDRMNESDDDTLISLIERKKVKNRKVSSKQLQEQTGEEKLSKDDSDDEILGSILKKKVKNRKESSEQLQEQTGEDKLSKDDSDDEILGSILKKKKNSLVSSEHLHENTNADELSRDDSDDEMLQSALNENQVGFMSSKQVEHKQVDPDLEDSDDEVAVNVLPDNAVSRRKLRMVIDLEDDD 1272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04348 1272 MobiDBLite consensus disorder prediction 1215 1229 - -
Tsu01g04348 1272 PANTHER TIMEOUT/TIMELESS-2 1 1210 IPR044998 -
Tsu01g04348 1272 MobiDBLite consensus disorder prediction 1188 1203 - -
Tsu01g04348 1272 MobiDBLite consensus disorder prediction 909 928 - -
Tsu01g04348 1272 MobiDBLite consensus disorder prediction 1149 1174 - -
Tsu01g04348 1272 Pfam Timeless protein 27 287 IPR006906 -
Tsu01g04348 1272 MobiDBLite consensus disorder prediction 1122 1136 - -
Tsu01g04348 1272 MobiDBLite consensus disorder prediction 1188 1244 - -
Tsu01g04348 1272 MobiDBLite consensus disorder prediction 1075 1095 - -
Tsu01g04348 1272 MobiDBLite consensus disorder prediction 1078 1095 - -
Tsu01g04348 1272 MobiDBLite consensus disorder prediction 1115 1136 - -
Tsu01g04348 1272 PANTHER PROTEIN TIMELESS HOMOLOG 1 1210 - -
Tsu01g04348 1272 MobiDBLite consensus disorder prediction 906 935 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04348 K03155 - gmx:100785399 1658.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04348 01 51423330 51433793 Tsu01g04348 01 51423330 51433793 ECH