Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04300 ATGCCAGCGACGGACTATCAAGGTTCGTCTCCTTCATCGTTAACAAATTTTGGTCGTTCAATTCTTAGCTTTCGTCGTGAACAGGTTCATTCAATGGAAGGGTCAACCTTAGAGATTGAACTTGATTCATTTCAACAACATGTTACTGATCGTTTTCTTGATCTATCATCTGTTGTTCAAGATGAATTGCTTTCACTGAAATGGGTTGGGAAGCTTTTGGATTGTTTTTTGATTTGTCAAGAAGAATTCAAAGCCATTCTTCATACTCATAAGGCTCAGATTCGATTATGGCAGAAGTTGTTGGAGATTGTTCTTTATGCATTGGATCATCAAAGGAGTGTTGGTGAAGGGCAATTTCGTAGAGCGAAAAAAGCTTTAATTGATTTGTCGATTAGTATGCTTGAGGATAATAAGGAGAGTGCTTCGATTGCACATAGAAATCGATCGTTTGGTCGGAGTAATGGTGGTAGAGACAAAGATCACATCCATCATCATAGTCATGGCAATAGTCATACTAGCCATGGCAATAATAGCTATCAACATCGGTCTTTGGGGCATTTTAGATCGCTTTCGTGGAGTGTTTCTCGTAATTGGTCTGCTGCTAGACAACTCCAAGCAATTGGGAGCAACATTAATCCTCCAAAAGCAAATGATCTTATGGCAACTAATGGTCTTGCAATGTCTGTTTACATCATGAATTCGATCTTGTTGTTTGTTATGTGGTCTCTTGTGGCTGCAATTCCATGCCAAGACCGTGGATTGCAGGTGCATTTCACCATTCCAAGGAGTTATACTTGGTCTATTCCATTCCTCTCGCTTCACGAGAGGATCATGGAAGAGTCAAAGAAGCGTGACAGAAAGAATGCTTGTGGCTTGCTTAGAGAGATTCAACAGATTGAGAAATGTGTTAGAGTTATGAGCGAATTGGCTGATTCGGTCCACTTTCCATTATCCGAGGAGAAGGAAGGGGAAGTTAAACAAAGAGTTCAAGAGGTTTCACATGTTTGTGATGCTTTGAAAGATGGACTCGATCCTTTGGAGCGCCAAGTAAGGGAAGTTTTCCATAGAATTGTTCGTAGCCGAACCGAAGGGCTTGACTCTCTTGGTAGGCCAAACAATGCTGAATAA 1128 0.4096 MPATDYQGSSPSSLTNFGRSILSFRREQVHSMEGSTLEIELDSFQQHVTDRFLDLSSVVQDELLSLKWVGKLLDCFLICQEEFKAILHTHKAQIRLWQKLLEIVLYALDHQRSVGEGQFRRAKKALIDLSISMLEDNKESASIAHRNRSFGRSNGGRDKDHIHHHSHGNSHTSHGNNSYQHRSLGHFRSLSWSVSRNWSAARQLQAIGSNINPPKANDLMATNGLAMSVYIMNSILLFVMWSLVAAIPCQDRGLQVHFTIPRSYTWSIPFLSLHERIMEESKKRDRKNACGLLREIQQIEKCVRVMSELADSVHFPLSEEKEGEVKQRVQEVSHVCDALKDGLDPLERQVREVFHRIVRSRTEGLDSLGRPNNAE 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04300 375 MobiDBLite consensus disorder prediction 140 165 - -
Tsu01g04300 375 Pfam Protein ROH1-like 93 368 IPR008511 -
Tsu01g04300 375 PANTHER BPS1-LIKE PROTEIN 93 373 - -
Tsu01g04300 375 PANTHER BPS1-LIKE PROTEIN 1 94 - -
Tsu01g04300 375 MobiDBLite consensus disorder prediction 140 180 - -
Tsu01g04300 375 PANTHER OS04G0688000 PROTEIN 93 373 - -
Tsu01g04300 375 PANTHER OS04G0688000 PROTEIN 1 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04300 Tsu-Chr1 50763584 50764810 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04300 - - gmx:100818059 558.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04300 01 50763584 50764810 Tsu01g04300 01 50763584 50764810 ECH
Tsu06g02734 06 35369954 35371524 Tsu01g04300 01 50763584 50764810 PCT