Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04277 ATGTTATTTGCAGTAGAAGGTGGAGGATTCTTCTCTGCTTCGGCTTCAGGGTATAGCAAGGGCCTGAGCCTACTCCTTTTGGGTCAGAGGAATGAGGATAAACCCATGAGAGTTGCACCGTGGAATCAGTACCAGTTGGTAGAACAAGAATCTGACCCTCAACTCCAGCTGGCTTCCACAAAGAATCGCTTTTCCCGCGGGTGTGCCTCCTTTGTTTGCTTTGGTCGCACTTCCGCAGGGCTTGATACTCCGTCACCTCTTAAAGTGGGCCCTGCCCAACAGCATGATGTTTCACCCGGGCTACCGGTTTCTAACAATGGAAAGGATCCCTCTGATCATGTAGATGATTGTAATGATGCTATAAAAGTCACACTAAAAAGTTGCATTAGAAAGCCACAGAATAATAAATCAGTTTCTGTTGAGGCTACTAATGAACAAGAAGCATCAGGCGGACATGATGCTTGTGGGGATCAAGCAGAGAGAAGGAGAGTGCAGTGGACAGATGCTGGTGGTAGCGAGCTTGTTGAAATACGAGAATTTGAGCCCAGGTATTTAATTATACAATTTTAG 570 0.4614 MLFAVEGGGFFSASASGYSKGLSLLLLGQRNEDKPMRVAPWNQYQLVEQESDPQLQLASTKNRFSRGCASFVCFGRTSAGLDTPSPLKVGPAQQHDVSPGLPVSNNGKDPSDHVDDCNDAIKVTLKSCIRKPQNNKSVSVEATNEQEASGGHDACGDQAERRRVQWTDAGGSELVEIREFEPRYLIIQF 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04277 189 PANTHER LIGHT-HARVESTING COMPLEX-LIKE PROTEIN OHP2, CHLOROPLASTIC 1 182 - -
Tsu01g04277 189 PANTHER LOW AFFINITY POTASSIUM TRANSPORT SYSTEM PROTEIN 1 182 - -
Tsu01g04277 189 MobiDBLite consensus disorder prediction 84 112 - -
Tsu01g04277 189 MobiDBLite consensus disorder prediction 134 157 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04277 - - mtr:MTR_1g098260 287.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04277 01 50564742 50566790 Tsu01g04277 01 50564742 50566790 ECH