Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04276 ATGGCGAAGAAGAGAAAATCCATAGCCACCACTCTCGATGAGGTTGATCGAACCATGTACGCTTCGTTTTGCAGTGCTGCTAATTCTCTTTCCCAACTTCACATGCATGCTCTCAATCACCAGAAACTCTCCTTTCAAGCTGGTCAACGACATGGCCTCGAAAATCTTTATCAGTGGATTTGGAGACAGCAAGAGGGTGGATCAAGAGTTGCAACAGTTGATATACTTAACTACATTCAGAATGAACTGGATTATTATGGAGAGGAGCAATCAATATCGCCTAGAGGACCACCGCCGCAACACCAACAGTTACAACCAGTAGTGCATGTCGCTAGTTCCGGCTTTCCAGTAACATCAGATTCTTCTTGCCAACCAGTTACGGGTCAGGGACTTCGGTCAGAGCACTGTGACGATCAACCCAAAAGTTTTGCATTCTCAAATGCTTTGTCAAGCCCCGTTCGTCTAAGTCTTCAGCATTATCAAGTTGGTGAGGGAGGGAGCTACATTAGTGGTCCCTCTATGGGGAATAGAAACCAGATAACAGAATCCAGCTTTCTTCACCAGCAAGGCAGGGACTCTACTGCATTCAGTTCCAACGATTCAGCCATGGACATGCATGCAGACTAG 627 0.4625 MAKKRKSIATTLDEVDRTMYASFCSAANSLSQLHMHALNHQKLSFQAGQRHGLENLYQWIWRQQEGGSRVATVDILNYIQNELDYYGEEQSISPRGPPPQHQQLQPVVHVASSGFPVTSDSSCQPVTGQGLRSEHCDDQPKSFAFSNALSSPVRLSLQHYQVGEGGSYISGPSMGNRNQITESSFLHQQGRDSTAFSSNDSAMDMHAD 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04276 208 PIRSF UCP009193 1 208 IPR016549 -
Tsu01g04276 208 MobiDBLite consensus disorder prediction 181 208 - -
Tsu01g04276 208 PANTHER NUCLEAR RECEPTOR FAMILY 2 GROUP C PROTEIN 1 208 - -
Tsu01g04276 208 MobiDBLite consensus disorder prediction 181 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04276 Tsu-Chr1 50557491 50560563 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04276 - - gmx:100796484 288.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04276 01 50557491 50560563 Tsu01g04276 01 50557491 50560563 ECH