Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04231 ATGTGTAGTATGTGCGAATATTGCGGTGCAAGCTTGACGGAATCAAATGCCGgcaataaaaaacatgaaaatgatAGTATAAAGTTGAATGGAAAAGTTCCCTCTAATCCTTGTAAATCTTGTGGAGAGAAGGTAGAGCGAGATAATGAAAAACGGAATAGTACAAATCCATACGCGACACTGTATATCAGTCCAACTGCATCACTGTCAAGTACTGACAGCTGCGTGTCCACTTCCAGCGAGTTTTCAGTTGATGTGAACTCATTTGACAGgaATAGCCGCGAAGACAGTATCGTCGAAGGTGTTATGGAAGATTTTGATCATAAGTCGAACGTGAAATCACAGATTGTGATGGAAAACAATACCCAAGAAAGAAGTAATAAGATCGAGGGTTATACTGTGAGAGACATAGAGATTGCTGAAGGATATATCTTTCAAGATGCTAAAGCCGATGATTCTGAAAACCCAACTGCTTTGTCTACTGAAGAAAATGACTATTCTTTTCCAGATGATCTGGATATCCAAACTTGGGAACCACCTGAGCCAGAAAACCCTCTGGATGATGTGGAAAATAGTGTGATTTGTGATGACGATGATGAAGAGCAGGGTATTGGAATTGCAGACTTGGGCGAGCCAACCTCTACGAGTAGTCCTAAGGATGAATTATGTGTGGGCTATAGGTTAAGAGAGGAAAGACAGAGAGAATTGGAAAAAGTAATGAATGGGAACTTTAAGGACCTTGTAGGCCAGCTTCTTAAATCCGTCGGAGTTTCCTCTTCTACTGAAGGTGATAAGAGTTGGGTGGACATAATTACATATTTATCTTGGGAAGCAGCTGCGTTTTTGAAGCCTGATGCTATCGGAGGCAATGCAATGAATCCTGATGGATCTGTTAAAGTGAAATGCATTGCAGTTGGTTCTCCCAGCCAAAGCCAACTATTCAAAGGTTCGGTCTTCAAGAAACATGCCGCTCACAAGCATATGCCAACTAAGCACAAAAAACCAAGGTTGCTGCTGATTAAGGGCACGGTTGGCCATTCTATGAATGCACTGTCCTCATTTAACTCCATGGATCAGGAGAAAGACTATCTGAAATCCAAaatggatattataaaaaaaagtcatccaaatGTTATATTAGTGGAGAAAACTGTTTCTCGTGATATACAAGAGGCAGTTCTGGAAAATGGGATGACACTGGTACTTGATATGAAGCTTCATCGACTGGAAAGAGTTGCACGTTGCACTGGGTCACCAATTCTTTCATGTGATGATTTGAACGGACAAAAACTAAGACAGTGTGACTCtatttattttgagaaatttgTGGAGGAACATGATGGTACTGGTGAAGGAGGAAAGAGGCCCACCAAGACCTTGATGTTCATTGAAGGATGTCCTACGCGTTTGGGCTGTACGATTTTGCTGAAAGGAACACACAGTGATGAACTGAAGAGAATCAAATGTGTCATGCGGTGTGCAGTTATAATGGCATATAACTTAATCCTTGAAACCGCCTTTCTTGTTGATCAGAAAGTAATGTTCTCTACCATTATTCCGGTTAATGCGGCGGATATCTTGCCAACCAATCAAGAATCCAGCGATTCAGCATCTATTATTTCAAGTGGTCCGTCGTCTCTTGATCattctgatgaaaatggaataGTTACTACTGATATTCCCATATGCAATGGACTTCATGAAAAATGCACCAATGGTTTAACCGTAGAATCTGAAGATGTTTCCCCATTTTCTTATGAACCGTATAATCCAGCTGTCTTTTCTGGATTCTCAGCAATTTCATCTTCTCTGAAGAAGGTTATGGGGGACAGTTTTCCCTTTGCTGCATCTGCTCCTTACCAGTCTCTATCTACATACTTTGGTTTCAATGGAAGGAAATCCGATGACCAGGTcaaaaattctttttctattgTAGACTCTCCGAAGGCAGATGAAAATACTGGGATTGAAGCAAACAGTCATTCAGATGAAGTAAAGTTACTTAATGATGGACAAAGCCTGTCTTCACCTGTGTACCTAGACTCCAACAGGGATATGAGTAAAGTTGATAATGATAGAAAAGAACTCCAGAGTAAAGACGATATCAATGCAGTGTTGGATTCTCAGAGTATTTTGGTCTTGATGTCTAGCTGTAATGCCTTAAGAGGAACCGTGTGCCAGCAGAGTCATTTTTCCCATATTATGTTCTACAAGAATTTTGACATCCCATTTGGAAAGTTTCTGCAGGATAACCTACTCAATCAGACAAGACTTTGTGATACCTGTCAAGAATTGCCGGAAGCTCACCTTTATTATTATGCTCATCACAATAAACAGCTTACTATACAAGTGAAGCGATTACCACCAGGAAATGTTTTAACTGGGGAGGCAGAAAGGAGAATTTGGATGTGGAGCCGTTGTGGAAAATGCAAGTCTTGTTCTACAAAGAGAGTGTTGATATCCTCCACTGCCCGTAGTCTATCATTTGGAAAATATTTGGAGCTTAGCCTTTCACATTATTCATCTAGCAGAAAATTGAGATGCGGCCATTCTCTTGATAGGGATTTTCTCTACTTCTTTGGATTAGGTCACATGGTTGCAGTGTTCAGATATTCTTCTGTTACTACTTATACCGTGTCTATGCCTCCTCAAAAGCTAGAGTTCAGTGGTGCAATGAAACAAGACTGGCTTTTGAAAGAGACTGAGAATGTGCACATGAAAGGCATATCTCTATTCACAGAAATTGCAAACTGTTTGAAGACAATACAATTTGATGGATCCGCAACATCTAACCGAGGATCAATAAGAGAATTCTCTGAGGTTGAGAAGATGTTAAAGCAAGAGCGAGAAGAGTTTGAGGCTAATATCAAGACTGTTGTTGCTAAGAAAGGTGATCCAGACCGGGCTGCCTTCAAACTTCTCTGTCTTAACCGATTGATGTGGGATCTTCTGATTGAATCCGTTGTGTGGAATCAACGCTTGAAATCATTACGCTCTCCTGAGAAGGTTGTGCAAGAGTATAGTTATTCAAAGATGGAAGGTATTGCTGGTAGAGAAACTGCATCTATGGGTAATCTTAGGGAAGCTGGCGATGCAAATGGGGATGCCCATGTACGAACTATGTCGGAAACATTTGTGGAAGTAAATGAAATCTCATTAAAGGAAATCCCTATCAGTGGATCTCCTCAAGAATCCAATGAACAAGATGATCCATCCAACACTCTTGATATCCCTCAGAATGTGAAAATACAAACTGTTGATGATTTGGGATCGAAGATATCTTCTGACCAAAAATTGGAATCGAGTTCAGATGTTTTAACTCAATTTCCTTCTACAAATGGTCATCTTCAAGTACATGAAAACATTCCAGTTGCTACAATTAGTCAACCTAGTCGTCCAATTGCTGATTCAAAGGTATTCAACAAGAGTGCTTCACTGCATTCACCTGTTTCGGTCTTGCCATATTCTAATGAATGGTTCTGGAAACCTTTTGCTGATATTCGACAGATGGGCATAAAGGAGTTTCAGAAAAGTTTCTTtccaaaatttgaatatttttgcaCCTCAATTACAGAACATGTGCCCACAGCCAATCAATTGATCACTGAAGAAGGTCCAAGGTTGCACATTCCTCTCAAGACAGATAATCATATTGTGTCTGATTTTGAGGGTGAACCCTCAAGCATAATTGCTTGTGTGCTGGCCTTGTTGAAAGATTCATCTGAGGTGACAGATAGTGTTGAAGGCGATTTAAGAGAGAATGGAATAACTTCTAAATCTACAGTTTTTTCAAATAGCTCTCAAGATTCAGATGCGCATTCTACCGGAAGCACACCTTCAGAAGAATCACAAGCATCTCGTGCTACGGAAAACCATAGCATAGAAATTCATCTGGGTTATGCAAAATCACTTGGGAGGGAAAAATATTCTGTgatttgtcattattttagGCAGTTCCGTGCACTTAGAAATCGGTGTTGTCCATCTGAGATTGATTATATCGCTTCTTTAAGCCGTTGTATGAATTGGGATGCCAAAGGTGGAAAAAGCAAGTCTTTTTTTGCAAAAACGCTTGATGACAGGTTCATCATAAAGGAAATCAAGAAGACAGAACTTGAAGCATTTTTGGGGTTCTCATCTCTGTATTTCAAACACATGAGAGAGTCATTTGAGTCTGGGAGCCAAACATGTCTTGCAAAAATCTTGGGGATATATCAGGTTACTAAAAGACACATCAAAAGTGGAAAAGAGGTTAAACATGACCTCGTGGTGATGGAAAATCTTTCCTACAATCGAAATATTGTACGCCAGTATGATCTTAAAGGTGCCCTTTTTGACCGGTATACTTCAGCTGCCGTTGGTGCTGGAGATGTTCTCTTGGATCAGAACTTTGTGAATGACATGAACTCTTCCCCATTATATGTCAGTCATAAAGCAAAGCGAGTTCTTCAGCGGGCTGTATGGAATGACACATCTTTTCTCAATTCAATCAATGTGATGGACTATTCCCTTCTGGTTGGAGTTGATTCTCAGAAGCGCGAGCTTGTTTGTGGGATCATTGATTATCTCAGGCAGTATACCTGGGACAAGCATCTTGAGACATGGATGAAGTCTTCACTTGTTGTGCCCAAGAATCTATTGCCAACCGTAATCTCTCCGAAAGAATACAAGAAGAGGTTCAGAAAATTTATGTCAACATATTTTTTGAGTGTACCAGATCACTGGTGTTCTCAAAAGTCCCCTATTCCTTGCAAACTTTGTGCTCCGGGGATGACCCTTCCCGACAAAAATCATAGTGTCACTAGGCTTCCAAATGGTTTCTCTGCCTAG 4830 0.3954 MCSMCEYCGASLTESNAGNKKHENDSIKLNGKVPSNPCKSCGEKVERDNEKRNSTNPYATLYISPTASLSSTDSCVSTSSEFSVDVNSFDRNSREDSIVEGVMEDFDHKSNVKSQIVMENNTQERSNKIEGYTVRDIEIAEGYIFQDAKADDSENPTALSTEENDYSFPDDLDIQTWEPPEPENPLDDVENSVICDDDDEEQGIGIADLGEPTSTSSPKDELCVGYRLREERQRELEKVMNGNFKDLVGQLLKSVGVSSSTEGDKSWVDIITYLSWEAAAFLKPDAIGGNAMNPDGSVKVKCIAVGSPSQSQLFKGSVFKKHAAHKHMPTKHKKPRLLLIKGTVGHSMNALSSFNSMDQEKDYLKSKMDIIKKSHPNVILVEKTVSRDIQEAVLENGMTLVLDMKLHRLERVARCTGSPILSCDDLNGQKLRQCDSIYFEKFVEEHDGTGEGGKRPTKTLMFIEGCPTRLGCTILLKGTHSDELKRIKCVMRCAVIMAYNLILETAFLVDQKVMFSTIIPVNAADILPTNQESSDSASIISSGPSSLDHSDENGIVTTDIPICNGLHEKCTNGLTVESEDVSPFSYEPYNPAVFSGFSAISSSLKKVMGDSFPFAASAPYQSLSTYFGFNGRKSDDQVKNSFSIVDSPKADENTGIEANSHSDEVKLLNDGQSLSSPVYLDSNRDMSKVDNDRKELQSKDDINAVLDSQSILVLMSSCNALRGTVCQQSHFSHIMFYKNFDIPFGKFLQDNLLNQTRLCDTCQELPEAHLYYYAHHNKQLTIQVKRLPPGNVLTGEAERRIWMWSRCGKCKSCSTKRVLISSTARSLSFGKYLELSLSHYSSSRKLRCGHSLDRDFLYFFGLGHMVAVFRYSSVTTYTVSMPPQKLEFSGAMKQDWLLKETENVHMKGISLFTEIANCLKTIQFDGSATSNRGSIREFSEVEKMLKQEREEFEANIKTVVAKKGDPDRAAFKLLCLNRLMWDLLIESVVWNQRLKSLRSPEKVVQEYSYSKMEGIAGRETASMGNLREAGDANGDAHVRTMSETFVEVNEISLKEIPISGSPQESNEQDDPSNTLDIPQNVKIQTVDDLGSKISSDQKLESSSDVLTQFPSTNGHLQVHENIPVATISQPSRPIADSKVFNKSASLHSPVSVLPYSNEWFWKPFADIRQMGIKEFQKSFFPKFEYFCTSITEHVPTANQLITEEGPRLHIPLKTDNHIVSDFEGEPSSIIACVLALLKDSSEVTDSVEGDLRENGITSKSTVFSNSSQDSDAHSTGSTPSEESQASRATENHSIEIHLGYAKSLGREKYSVICHYFRQFRALRNRCCPSEIDYIASLSRCMNWDAKGGKSKSFFAKTLDDRFIIKEIKKTELEAFLGFSSLYFKHMRESFESGSQTCLAKILGIYQVTKRHIKSGKEVKHDLVVMENLSYNRNIVRQYDLKGALFDRYTSAAVGAGDVLLDQNFVNDMNSSPLYVSHKAKRVLQRAVWNDTSFLNSINVMDYSLLVGVDSQKRELVCGIIDYLRQYTWDKHLETWMKSSLVVPKNLLPTVISPKEYKKRFRKFMSTYFLSVPDHWCSQKSPIPCKLCAPGMTLPDKNHSVTRLPNGFSA 1609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04231 1609 SUPERFAMILY SAICAR synthase-like 1306 1568 - -
Tsu01g04231 1609 MobiDBLite consensus disorder prediction 148 169 - -
Tsu01g04231 1609 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 165 1586 - -
Tsu01g04231 1609 Gene3D - 1428 1569 - -
Tsu01g04231 1609 MobiDBLite consensus disorder prediction 1056 1078 - -
Tsu01g04231 1609 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1251 1568 IPR002498 GO:0016307|GO:0046488
Tsu01g04231 1609 Gene3D GroEL 309 478 IPR027409 -
Tsu01g04231 1609 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1253 1427 IPR027484 -
Tsu01g04231 1609 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1346 1512 IPR002498 GO:0016307|GO:0046488
Tsu01g04231 1609 Pfam TCP-1/cpn60 chaperonin family 247 507 IPR002423 GO:0005524
Tsu01g04231 1609 PANTHER 1-PHOSPHATIDYLINOSITOL-3-PHOSPHATE 5-KINASE FAB1D-RELATED 165 1586 - -
Tsu01g04231 1609 SUPERFAMILY GroEL apical domain-like 310 478 IPR027409 -
Tsu01g04231 1609 MobiDBLite consensus disorder prediction 1258 1290 - -
Tsu01g04231 1609 Coils Coil 935 962 - -
Tsu01g04231 1609 CDD PIPKc_PIKfyve 1308 1568 IPR044769 GO:0000285
Tsu01g04231 1609 SMART PIPK_2 1280 1569 IPR002498 GO:0016307|GO:0046488
Tsu01g04231 1609 CDD Fab1_TCP 247 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04231 Tsu-Chr1 50152682 50163443 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04231 328 1578 Acyl Lipid Metabolism Gene Families AT1G34260 47.352 0.0 1080
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04231 K00921 - gmx:100809696 2339.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04231 01 50152682 50163443 Tsu01g04231 01 50152682 50163443 ECH