Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04229 ATGCCCCCAATTGCGAAAAACAACAATGGCCCTTTCTCTATTCCCACaatctttctcttcttcactctcattttcattctctttctctcattcttcttcttcccaTTCACTTCTTCCACCACCAAAATCATCTCAAAcccttctctttttcttcaaaccTCCACCTCTTCCGCCATCAATGTCTACGTCTCCGACCTTCCCAGATCCCTCAACTACGGCCTCCTTAACCGTTACTGGTCCTTCAACGCCGATTCCCGAGTTGGCAGTGACTCAGATCGTGAAATTCGATCCACCAATTTAGGTAAAACCCTAGAATTTCCACCCTATCCGGAGAACCCAATTATCAAACAGTACAGTGCGGAGTATTGGATCATGGGGGATCTTATGACACCACCTGAATTACGAACTGGGTCGTTTGCAAAACGGGTTTTTGATGCACGTGATGCTGATGTggtttttgttcctttttttgcTACTATTAGTGCTGAATTGCAATTGGGTGTGGCTAAAGGTGTCTTTAGGAAGAAAGTTGGGAATGAGGATTATCAGAGACAGAGAGAGGTTATTGATTTTGTGAAGAAAACTAAAGCTTGGAATCGTTCTGGTGGTAGAGATCATGTGTTTGTTCTCACTGACCCAGTTGCAATGTGGCATGTTAAAGATGAGATTGCTCCGGCTATTCTCCTTGTTGTGGATTTTGGTGGGTGGTATAGACTTGACTCAAAATCATCCAACTGTAGCTCATCTGACATGATTCAACACACTCAAGTTTCTGTAATTAAAGACGTGATTGTGCCGTACACACATCTTTTACCCAAGTTACACTTGTCAGAAAACAAGGAACGTCGTAACCTTCTTTATTTTAAAGGAGCCAAACACAGGCACCGGGGAGGCCTAGTTAGAGAAAAGTTGTGGGATCTATTGACTAACGAGCCTGGTGTGATAATGGAGGAGGGCTTCCCTAATGCGACTGGTCGAGAGCAATCAATACAAGGGATGAGAACATCAGAGTTTTGCCTACATCCAGCTGGGGACACACCCACTTCATGCCGACTTTTTGATGCCATTCAAAGTCTTTGTATACCTGTTATTGTCAGCGACAACATTGAGCTCCCATTTGAAGGTTTGGTGGACTATACAGAATTTTCAGTTTTTGTAGCAGTTGGTGATGCACTTAAACCAAGCTGGCTAGTCAATCATCTTCAAAGGTTTTCAAAACAACAGAAAGACGTGTTCCGACAAAACATGGCTCAGGTACAGCCCATGTTTGTTTATGATAATGGTCATCCAGGTGGTATTGGTCCTATACCTTTGGATGGTGCAGTAAATCATATATGGAAGAAAGTTCACGAAAAACTGCCAATGATAAAAGAAGCCATAATTCGAGAGAAAAGAAAACCACCTGGTGTGTTGGTTCCACGGCGATGTCAATGTACTTAA 1440 0.4028 MPPIAKNNNGPFSIPTIFLFFTLIFILFLSFFFFPFTSSTTKIISNPSLFLQTSTSSAINVYVSDLPRSLNYGLLNRYWSFNADSRVGSDSDREIRSTNLGKTLEFPPYPENPIIKQYSAEYWIMGDLMTPPELRTGSFAKRVFDARDADVVFVPFFATISAELQLGVAKGVFRKKVGNEDYQRQREVIDFVKKTKAWNRSGGRDHVFVLTDPVAMWHVKDEIAPAILLVVDFGGWYRLDSKSSNCSSSDMIQHTQVSVIKDVIVPYTHLLPKLHLSENKERRNLLYFKGAKHRHRGGLVREKLWDLLTNEPGVIMEEGFPNATGREQSIQGMRTSEFCLHPAGDTPTSCRLFDAIQSLCIPVIVSDNIELPFEGLVDYTEFSVFVAVGDALKPSWLVNHLQRFSKQQKDVFRQNMAQVQPMFVYDNGHPGGIGPIPLDGAVNHIWKKVHEKLPMIKEAIIREKRKPPGVLVPRRCQCT 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04229 479 Pfam Exostosin family 57 400 IPR040911 -
Tsu01g04229 479 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 14 469 IPR004263 GO:0006486|GO:0016757
Tsu01g04229 479 PANTHER EXOSTOSIN FAMILY PROTEIN 14 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04229 Tsu-Chr1 50147269 50150342 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04229 - - adu:107467786 751.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04229 01 50147269 50150342 Tsu01g04229 01 50147269 50150342 ECH