Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04223 ATGACAAATTTGAATCTCAGTAGTGGTTTTACATCGGGAGTTACaacaaaaggaaataaaatttcaattttggccTTCGAAGTAGCAAACACAATAGTTAAGGGTGCCAATCTAATGCAATCTCTTTCAAAAGAGAACATTAAGCATTTAAAAGAGGTAGTTCTACCATCTGAAGGAGTGCAAAATTTGATATCTACAGATATGAATGAACTCCTGAGAATTGCCGCTGCAGACAAGAGAGAAGAATTGAGAATATTTTCTGGCGAAGTTGTGCGTTTTGGAAATCGATGCAAAGATCCTCAGTGGCACAACCTGGAACGCTATTTTGAGAAGTTAGGTTCAGAGCTTTCACCGCAAAGGCAATTGAAAGAGGAGGCAGAAATGGTGATGCAACAATTAATGAGCTTTGTTCAATATACCGCTGAATTATATCATGAATTACATGCCTTAGACAGGTTTGATCAAGATTATCGACGCAAGCTTCAAGAAGAGGATAATTCAAATGTCATACAGAGAGGAGACAGCCTTGCGATCTTGAAAGCAGAACTGAAGAGTCAAAAGAAACATGtaagaaatttgaagaaaaaatcacTCTGGTCCAAGATTTTGGAAGAGGTGATGGAAAAGCTTGCAGATATTGTCCATTTTCTATATTTGGAGATAAACGAAGCATTTGGTAGTGCCGATACGGATAAGCAAGTGAAAGATTTTCAAGGAAACCATAAGAAGTTGGGAGCTGCTGGTCTTGCTTTGCATTATGCAAACATTATCACTCAAATTGATACTCTGGTGTCTCGGTCAGGTTCTGTGCCTCCTAATACTAGGGATGCTTTATATCAAGGGTTACCGCCTAATGTAAAATCAGCATTGCGCTCAAGGTTACAGTCGTTTCAGGTTAAAGAAGAGCTTACTGTTCCACAAATCAAAGCTGAAATGGAGAAAACTTTGCAGTGGCTTGTTCCTATTGCTGCCAACACAACAAAAGCTCATCATGGCTTTGGATGGGTTGGAGAATGGGCAAATACAGGGTCTGATGTCAACCGTAAACCTGCGGGTCAGTCAGACTTGTTGAGAATCGAAACACTACACCACGCCGATAAAGATAAAACAGAAGTGTATATACTTGAACTGGTTGTCTGGCTACATCACCTAGTGAGTCAAGTAAGAGTTGGTAACGGAGGAATAAGGTCCCCAGTCAAATCCCCAATTCGTTCTCCTAACCAGAAGACGGTGCAGTTGTTTGCGGAAAAAGGCTGCTCTACTTCTCCGTTGTTAACAATCGAAGATCAACAAATGCTTCGAGATGTTGGTAAGAGGAAATTAACGCCAGGCATCAGTAAAAGCCAGGAATTTGAAACTGCCAAGACTAGGTTGAGCAAACACCATAGGCTAAGCAAGAGTAGTAATCATTCCCCAATCAGTGAAAGTAAAAGCGATATATTCTCTACAAGGAGGTTACCTTCTGTTCCTGTCATTGACTTTGATATTGACCGAATGAAGGCCTTGGATGTCATTGATAGAGTGGATACAATTGGAAGTTGA 1542 0.3943 MTNLNLSSGFTSGVTTKGNKISILAFEVANTIVKGANLMQSLSKENIKHLKEVVLPSEGVQNLISTDMNELLRIAAADKREELRIFSGEVVRFGNRCKDPQWHNLERYFEKLGSELSPQRQLKEEAEMVMQQLMSFVQYTAELYHELHALDRFDQDYRRKLQEEDNSNVIQRGDSLAILKAELKSQKKHVRNLKKKSLWSKILEEVMEKLADIVHFLYLEINEAFGSADTDKQVKDFQGNHKKLGAAGLALHYANIITQIDTLVSRSGSVPPNTRDALYQGLPPNVKSALRSRLQSFQVKEELTVPQIKAEMEKTLQWLVPIAANTTKAHHGFGWVGEWANTGSDVNRKPAGQSDLLRIETLHHADKDKTEVYILELVVWLHHLVSQVRVGNGGIRSPVKSPIRSPNQKTVQLFAEKGCSTSPLLTIEDQQMLRDVGKRKLTPGISKSQEFETAKTRLSKHHRLSKSSNHSPISESKSDIFSTRRLPSVPVIDFDIDRMKALDVIDRVDTIGS 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04223 513 Pfam Protein of unknown function (DUF668) 244 328 IPR007700 GO:0045927
Tsu01g04223 513 MobiDBLite consensus disorder prediction 446 480 - -
Tsu01g04223 513 Pfam Domain of unknown function (DUF3475) 23 79 IPR021864 GO:0045927
Tsu01g04223 513 PANTHER OS01G0873900 PROTEIN 1 511 IPR045021 GO:0045927
Tsu01g04223 513 Coils Coil 176 196 - -
Tsu01g04223 513 PANTHER - 1 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04223 Tsu-Chr1 50098231 50105219 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04223 - - mtr:MTR_1g096970 953.355
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04223 01 50098231 50105219 Tsu01g04223 01 50098231 50105219 ECH
Tsu01g04223 01 50098231 50105219 Tsu06g02590 06 33335393 33344565 PCT