Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04204 atggGCGACAAACGAAAAAAGCACCGTCGTCACCACGATTCAACCtctccttcttcttcatcctctCCCTCCACCGACTCCGATTCAGACTCCGACCGCTCTTCTCGCCGCCGCCGTCACCGCCGTGAAAAAGACCGCCGCAGAAAAACCGAAGGAAGCTCCAAGCGAGAAAAGGAGAGCAGAAGaaaggaaaagagaaaaaggagagaTAGAGATAAGAAAAAAACCAAGCGCCACCACTATTCAGATGAGTCCAATTCTTCCGGCGATGAAATTCAACCTCAAACCGCACTCCTTGAAATGATGACAGAGTTTCCCAATGTTGGCAACGATTTGATGCAGCTATTGCAAATGATTGATAATGGACAAGCTGTGGACATAAAGGATATATCAGAGAGGTCTCTAGTGAAGCATTTGAAGAAGCTCTTCATTTCCTTAAATCTTAAGGAAAATGGGGATAGAGTTTTTTTGTTGCCTTCTAAAGCTTCTCCTACTTTAGAGGTTGTTGGCCCTCTAATTCAATCTTATATGCATCCGGCGAATGATCGAGTGGAACCTTCAGCACCGTTGCCTGAAACATCGGCTCCGGCAGAACAGACGGTTGATGATAATTCAATAGAACCTCCTGAGGATCATTCTGTTGGTCCTAGGAAAAGGGTGATTGGTCCTGCAATGCCGTCTGCTGAATTACTTGCTGCTGCTGCTAAATTAACAGAGGCACAGACCGAGTTCAGAGAAGCTGAATTGGACGATGATACTGAGCTATTTGTGGGACCTCCACCTCCTGCTATGGTTACTGAAGCAGAATCAGCTAATGAAGCAGAACGTTTTGAAGAGGTCACCAGGATAATGGAAGCTGGGATCGACAGCCCATATGATATTCTGGGAGTTAACCATAATATGTCTGATGTTAACGTAAAGAAAAGGTACTGGAAGATGTCACTCTTAGTTCATCCAGATAAATGCTCTCATCCACAAGCCCATCAAgcatttattaaattaaataaagctTTTAAAGAGTTACAAGATCCAGAAAAGCGGAAAGCAATGGATGataaaatcaaactcaaacaaGAACAGGAGGACTTTAAGGCTGAACTTAAAGTCATGCGAGAGGCTGCACTGTGGAGAAGATCCCAAGGTATATCCATGGAAGGTGATGAGGAGCTTCTGGCACAGACAGAGGTTAAAGTGGAACCCACGAGAGATGAATGGATGACAACACTGCCTCCGGAGAGGAAAGTAAGTACTGTCAATCATATATCTTTTACTTCTAGGCAAGCTTCATTAGTACAGTAG 1299 0.4196 MGDKRKKHRRHHDSTSPSSSSSPSTDSDSDSDRSSRRRRHRREKDRRRKTEGSSKREKESRRKEKRKRRDRDKKKTKRHHYSDESNSSGDEIQPQTALLEMMTEFPNVGNDLMQLLQMIDNGQAVDIKDISERSLVKHLKKLFISLNLKENGDRVFLLPSKASPTLEVVGPLIQSYMHPANDRVEPSAPLPETSAPAEQTVDDNSIEPPEDHSVGPRKRVIGPAMPSAELLAAAAKLTEAQTEFREAELDDDTELFVGPPPPAMVTEAESANEAERFEEVTRIMEAGIDSPYDILGVNHNMSDVNVKKRYWKMSLLVHPDKCSHPQAHQAFIKLNKAFKELQDPEKRKAMDDKIKLKQEQEDFKAELKVMREAALWRRSQGISMEGDEELLAQTEVKVEPTRDEWMTTLPPERKVSTVNHISFTSRQASLVQ 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04204 432 Coils Coil 346 373 - -
Tsu01g04204 432 MobiDBLite consensus disorder prediction 60 76 - -
Tsu01g04204 432 Coils Coil 230 250 - -
Tsu01g04204 432 Pfam DnaJ domain 291 351 IPR001623 -
Tsu01g04204 432 MobiDBLite consensus disorder prediction 1 92 - -
Tsu01g04204 432 SMART dnaj_3 289 346 IPR001623 -
Tsu01g04204 432 Gene3D DnaJ domain 272 374 IPR036869 -
Tsu01g04204 432 ProSiteProfiles dnaJ domain profile. 290 355 IPR001623 -
Tsu01g04204 432 PRINTS DnaJ domain signature 292 310 IPR001623 -
Tsu01g04204 432 PRINTS DnaJ domain signature 310 325 IPR001623 -
Tsu01g04204 432 PRINTS DnaJ domain signature 326 346 IPR001623 -
Tsu01g04204 432 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 1 424 - -
Tsu01g04204 432 CDD DnaJ 291 343 IPR001623 -
Tsu01g04204 432 SUPERFAMILY Chaperone J-domain 265 348 IPR036869 -
Tsu01g04204 432 MobiDBLite consensus disorder prediction 181 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04204 Tsu-Chr1 49879505 49884418 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04204 - - gmx:100788598 535.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04204 01 49879505 49884418 Tsu01g04204 01 49879505 49884418 ECH