Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04201 ATGGCTCAGCAGAGGCAATCGGGAACGGAGAGGCTTGGGGTGAGACTGGGTTCTCACGATCTACATAACACCAATGGCTCCGCTGATCATGTTTCTGTTGCGATTCGTGGTGGTGTTTCTCATAAACAGCAAAGGTTCCGGCGATCGCCGCGATCCGACAGAGGAGCGCGTTTTACGGTGGTTGCAATCTTAGTTTTTCTCTTCCTTGTACTTGTTGTCACTTTTCTGGCGTTTTCTTATATTTCTAGAGAAGAAATAAGTGAAAAGGGTGATGATCATGATACTGATGAAGTAAAGAATGATTCTGATTTTCTTATAAATGTACCACGGATAGAGAAGAAAGTTCTTGATTTTGGACATGTTTCTGGGGGACATGGTAGAGATTCGAGGTATTGGGATAAGGATGATAGGAGAAGGGATGGTGATTATGATGAGGATATGAAGGAGCAGATAAGTAGGGATCTTGGAGATGCAAATGTTGAAGATGAGGCTCGTGTAAAAACGAATCTCGAGATTAAGTCTTCTCAGGATGGTTCTTACAAGGGTTTAAAGCGAAAAGGTGTTGGCTTGTATAATGAAGCGGGGCGTCATGAATTGAAAAGGTATGAAGCTGAGTACGAGGCTTCTTTGAAGAATGTGAGACATTCTGCTGAAGGTGATGAGAAATTGCCGCACGATGCTGATATGGAAAAGAAGAATGCGGCAGTTGACATTGATGATGAGTATGATGACTTTTTCGATGCTCATGATGGTCAAACGGAAGAGTCTGCTGATAGTGGGAAACATGTTAATTCTGATACACTAAGTTTGGACGATGAGGTTCAGAAAGAATCTCATGGTTCTTTGGATAATGATGATATTGCTTCTGAGGAGGATATTGATGGGGAATCTTCcactattaacaaaaaaaaatctcacgGTGGAAAAACAAATTCTAAACTTGCAAATACTGAAACAAAGAGGAAAGGAAAGCATCACAAACACTCAGGATCCTGTGAGATGAAGTTGTTAAACTCAACTTCACAACTTGTAGAACCGCTAGAAAGTCGAAAATTTGCAAGATTTAACTTACAATACGCAGAGACAGAAGAGAAGCCACTGGGAGTAGAACAATGGATGCCAAGATTTGCTGGCCATCAGAGcttagaagagagagaaaattcatttttgGCACGTGATCAAAACATAAAATGTGGTTTTGTTAAAGGTCCTGAAGGTTCACCCAGCACTGGATTTGACATGTCAGAAGATGATGAAAGTTACATTAGCAGATGCCACATTGCTGTGATTTCATGCATATTTGGAAATTCTGACCGTTTGAGGACCCCAGCCACCAAAACGATCACTCGTTTGTCAAGGAAGAATGTCTGCTTTGTTATGTTTACTGATGAAGTTACAGTACGGACACTTTCTTCTGAAGGCCACGCACCTGATAGAATGGGTTTTATCGGCTTTTGGAAGTTAGTGGTAGTGAAGAATCTACCTTATGATGATATGCGGCGAGTGGGCAAAATACCAAAGTTATTGGCCCATCGACTTTTTCCCTTTGCAAGGTATTCAATTTGGTTGGATAGCAAATTAAGGCTGCAGCTTGATCCTTTACTCATCTTGGAGTACTTTTTGTGGCGAAAGGGTTATGAATTTGCAATATCCAATCACTATGACCGGCACTGTGTGTGGGAAGAGGTGGTGCAAAACAAGAAATTGAACAAGTATAATCATACGGTTATAGATCAACAGTTTGCATTTTACCGGGCTGATGGACTCCAAAGATTTAATGCATCAGATCCAAACAAGCTTCTTCCAAGCAaTGTACCAGAAGGTTCTTTTATTATTAGGGCACACACCCCTATGTCAAATTTGTTCAACTGTCTTTGGTTCAATGAAGTTGAACGATTTACTCCTCGTGATCAGCTGAGTTTTGCGTATACTTATCAGAAGCTGAGAAGGATGAATCCTGATAAACCTTTTCATCTTAATATGTTCAAGGACTGTGAAAGGAGACACATGGCCAAGTTGTTCCATCATAGGATGGACGAGAAGAGGGTTACACGTCAAAAAGCAACCGAATAA 2073 0.4018 MAQQRQSGTERLGVRLGSHDLHNTNGSADHVSVAIRGGVSHKQQRFRRSPRSDRGARFTVVAILVFLFLVLVVTFLAFSYISREEISEKGDDHDTDEVKNDSDFLINVPRIEKKVLDFGHVSGGHGRDSRYWDKDDRRRDGDYDEDMKEQISRDLGDANVEDEARVKTNLEIKSSQDGSYKGLKRKGVGLYNEAGRHELKRYEAEYEASLKNVRHSAEGDEKLPHDADMEKKNAAVDIDDEYDDFFDAHDGQTEESADSGKHVNSDTLSLDDEVQKESHGSLDNDDIASEEDIDGESSTINKKKSHGGKTNSKLANTETKRKGKHHKHSGSCEMKLLNSTSQLVEPLESRKFARFNLQYAETEEKPLGVEQWMPRFAGHQSLEERENSFLARDQNIKCGFVKGPEGSPSTGFDMSEDDESYISRCHIAVISCIFGNSDRLRTPATKTITRLSRKNVCFVMFTDEVTVRTLSSEGHAPDRMGFIGFWKLVVVKNLPYDDMRRVGKIPKLLAHRLFPFARYSIWLDSKLRLQLDPLLILEYFLWRKGYEFAISNHYDRHCVWEEVVQNKKLNKYNHTVIDQQFAFYRADGLQRFNASDPNKLLPSNVPEGSFIIRAHTPMSNLFNCLWFNEVERFTPRDQLSFAYTYQKLRRMNPDKPFHLNMFKDCERRHMAKLFHHRMDEKRVTRQKATE 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04201 690 MobiDBLite consensus disorder prediction 249 286 - -
Tsu01g04201 690 Coils Coil 192 212 - -
Tsu01g04201 690 MobiDBLite consensus disorder prediction 245 335 - -
Tsu01g04201 690 MobiDBLite consensus disorder prediction 124 145 - -
Tsu01g04201 690 MobiDBLite consensus disorder prediction 1 27 - -
Tsu01g04201 690 Pfam Protein of unknown function (DUF616) 357 676 IPR006852 -
Tsu01g04201 690 PANTHER ALKALINE CERAMIDASE-RELATED 23 689 IPR006852 -
Tsu01g04201 690 PANTHER TRANSMEMBRANE PROTEIN (DUF616) 23 689 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04201 Tsu-Chr1 49860857 49868151 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04201 - - gmx:100810524 1051.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04201 01 49860857 49868151 Tsu01g04201 01 49860857 49868151 ECH