Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04191 ATGAAGATGGGTGGTTCCACCTTCACTCACTTCTCTTATTCTTCACCTTCTCTTTCATCTCTCTTTCTCCCATCTAAATCCACCTTTCAACCTCTTCCCTCCACCCTTATCTCTAACCCTTTCCCTTCCAAACTTGCCACTTCATCACCATGTTCTCTAAAAAAGATTAAAGCCTTTGGAATTCAGCAAACAGGATCCACTCCACATGGAGACAATAACCTTGATGCAGTCAAGAGTAGGATTGTGCTCCAGATGTTTCAAAGGGCAATGCCAATGGAACCCCTTATAACCATTTTCACAAAACAACAATCCGAGAGTAATTCCCTGTTCtcatttttcttgtattttttgcATACCAAGAGTGAATTGGTGTCATGTGTTATATGGAAAAATGGCAAATGTTGTAAGGTGAATGACTTCACAACGGAAAATCTTCAAGATTGGAGAAAGTCATCCAAATGGGTTTTGGCATTCTTGTTTGGACAAACTATATCAGTTATTTCTCCTGATGTTTCATACGCAAGTGACTCAATGAAGATAAATGAGATGTATCAGGTTGGCGAGCTGTTTGACTTAGGAATCCAACTAATATATTTGCTACTGTTGTTGGGTTTGCTTGGGGCTGGAACTTACTACGTGATTCGCCAAGTTCTTGTCCGCAGAGAACTTGACCTTTCTGCCAAAGAGTTGCAGGAGCAAGTCAGAAGCGGTGATGCAAGTGCGACTGAGCTGTTTGAACTTGGTGCAGTGATGTTACGGAGGAAATTTTACCCAGCTGCTACCAAGTTCTTGCTTCAAGCAATTGAGAAATGGGATGGAGAAGATCAGGATCTTGCACAGGTTCACAATGCTCTTGGTGTCAGCTATGTTCGTGATGGGAAGCTTGAAAAAGGAATAGCTCAGTTTGAGACAGCTGTTAAGATTCAACCAGGCTATGTCACAGCATGGAACAATCTTGGTGATGCTTATGATAGTAAAAAAGAATTTGTGTCTGCTCTAAAGGCATTTGAAGAAGTTCTTCTATTCGATCCTAACAACAAGATTGCGCGGCCCAGAAGAGATGCTTTGAAGGAACTTGTTGGAATGTCCCAAGGAGTTACTGTCAAATatagagagaagaaatga 1125 0.4036 MKMGGSTFTHFSYSSPSLSSLFLPSKSTFQPLPSTLISNPFPSKLATSSPCSLKKIKAFGIQQTGSTPHGDNNLDAVKSRIVLQMFQRAMPMEPLITIFTKQQSESNSLFSFFLYFLHTKSELVSCVIWKNGKCCKVNDFTTENLQDWRKSSKWVLAFLFGQTISVISPDVSYASDSMKINEMYQVGELFDLGIQLIYLLLLLGLLGAGTYYVIRQVLVRRELDLSAKELQEQVRSGDASATELFELGAVMLRRKFYPAATKFLLQAIEKWDGEDQDLAQVHNALGVSYVRDGKLEKGIAQFETAVKIQPGYVTAWNNLGDAYDSKKEFVSALKAFEEVLLFDPNNKIARPRRDALKELVGMSQGVTVKYREKK 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04191 374 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 72 366 - -
Tsu01g04191 374 Pfam Tetratricopeptide repeat 284 343 - -
Tsu01g04191 374 ProSiteProfiles TPR repeat profile. 279 312 IPR019734 GO:0005515
Tsu01g04191 374 PANTHER TETRATRICOPEPTIDE REPEAT DOMAIN-CONTAINING PROTEIN PYG7, CHLOROPLASTIC 72 366 - -
Tsu01g04191 374 SUPERFAMILY TPR-like 238 351 IPR011990 GO:0005515
Tsu01g04191 374 Gene3D Tetratricopeptide repeat domain 212 365 IPR011990 GO:0005515
Tsu01g04191 374 SMART tpr_5 279 312 IPR019734 GO:0005515
Tsu01g04191 374 SMART tpr_5 313 346 IPR019734 GO:0005515
Tsu01g04191 374 ProSiteProfiles TPR repeat profile. 313 346 IPR019734 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04191 - - ahf:112712552 389.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04191 01 49799351 49803038 Tsu01g04191 01 49799351 49803038 ECH