Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04189 ATGGCTTCAATCGCCGataaccctaaccctaaccctaatcaAGAACCAGAAGACTCCATAATCCCAGTATTAACAGttttcaaaaacaaatcaatCCTCAAGAACATCTTCATTGTTCTCAACAACAACGATAATGAcgataacaacaacaacaacgatCACACTCTTCTGGTCGGTCGACACCCAAATTGCAACATAGTCCTTACTCATCCTAGCATCAGTCGTTTCCATCTACAAATTCGATTCACTCCTTCTTCCCGCTCAATTTCACTCCTCGATTTATCTTCTGTGCATGGAACTTGGGTGAGTGGTAGAAAGCTTGAACATGGTGTGAGTGTTGAATTAAAAGAAGGTGATAGCTTTCAACTTGGGGTTTCAAGTAGGATTTATCTTCTTCACTTTGTTTCCAAATTCGATGCTGATGCATTAAAGAAGATTGGTTCTTTAAGTTGTGATGATGAAAAGAAGAACCAATCTAAAGATGAGACATTTGAAGTTGATAATGACTCTTGTGGAAATGAAAAATCATGTTGTGATGGTCAAAACTGTTTCCTGTCTCCACCTTATGTGCAATCAGTTGATGAATCTGGTAACACGCAGATAAATGAAGCTTGTCCAGATGTGGAGATGCCGGAAGAGACTAATTTGCTTGGCGCATTGAGGGAATGTTTTAAACACAACATATGTATCCTGGGCCCTAAATTGAACCAACATTCTTCAGCGGAAAAACAGCGGATTAATCCTGAAGTGTCTTTTGATGAAAAAGACGATGCTGCTGTGGATGTGATATCTAAAGAATCTGATTTTGAAGTCACGTTTGAAGATACTGACAAGATTGAAGATATTTTAACTACTGGATCAAGAGTTTTTGATTCTGAGGACATGACTTATTCTGAATCTCATCCAACCAATTCTGATGCTGAACTTTCTGCAGATTCACTCTCTGATAGAGAAGAACAAGGTAATTGCGGTGAAAAGTATGAGACAGAATTGCAGAACCTGAATGCTAATTGTGTTGAGAAAGGGTATTCTCTAAATGAAATTGTTGAAGATATCGAAAAGATGTGCATTGAAAATACGGATCCTGCAtcttttgatgaaaatggtgtAGCTTCAGTGAAGGTAGAACCTAGAGAACACAAATTAGAATTCTTCTTTGAAGAAAATGTCAGGATTGATGACATTTTAACTAGTGTTGCAAGACTTTTCATTTCTGAAAACACATCTTCACTAACCGAGGAAGCAATTCCTGTAATCAATTTTCAACAAATCAAGATTGTTGAAGAAGTTGGTGTGGATTCAATATCTGATggagaaaaggaaaataaaggTGACAAGGAATTGCAGGCATACCTAAATGTCAAACCTTGTGATGAAGAAGGTAGCTCACTGGATGAAACAGTTGAAGATACTGTGAAATCCTTTCAGATAGAGTCACTTAATCCTTCGGTGACTCAGGAACCTGATTTAGAGATTACAGACAAGAAAGAGAATCAGACCCTGCAATCTCCTGTTGCTTTGGATGGAAACATTGACGTGGGAATCCTTGAAAGAAGCTGTATAGAAGAATCAGCAAAGGGGAGTTCAACCTTTGGTAGTGATGAAGAAGGTAGCTCACTGGATGAAACATATGAAGATACTGTGAAATCCTTACAGACAGAGTCACTTAATCCTTCAGTGACTCAGGAACCTGATTTAGAGATTACAGACAAGAAAGTGAATCAGACCTCGCAGTCTCTTGTTGCTGTGGATGGAAACATTGATGTGGGAACCTTTGGTAGTgatattttgtcaaaaagagATAAGGCTGCGAGTGCGCCTCAAGATCGAACCAGGAAGAGCAGATTATTGAACACACCTAATGTTGGCACTAAATTTGTAATGAGTAACTTGAAGGATATCGATATCACAAATAAACCAATGCCAAAGGATATTTTCTCTGATATTTTCTCTGTCTGGGATGAAGTTGAAATGTTCACTCCAAATAAGGAAAACTCCTCAATCCCCACAAACACTTTTCACATGCAGTTTATGGGAAAGAAAGGTGTGCTAGACGAAAGTAAAAGTTCCAAGTCACAAAGGTCACATAATTTGAAGGCTAGTTTTAGCCCCATCATCTATTCAGCTGAAAGAAGTGCAAGTCCGATTTCAAACAAAGAGAACCAGACTCCAAGAGAAGCACAAGAATGGAAGTCACAAAGGTCACATAATTTGAATGCCAATTTTAGTCCCATCATCTATTCAGCTGAAAGAAGTACAAGTGCAATCTCAAACAAAGAGAACCTGACTCCAAGAGAAGCACTAAAATGGATGTCCGGGAGAAAGCCTCTTGAGTGTCACGATACTACAGAATTAGGAAAGAAGAGAGTGGAACGAAGACCCTTACAATCGCTAATGAATTCTGGAGGCAATTTCAATTCAAGGATCTCTAGTCCTCTTTCTGCTGCAAAATCCATTGTTGGGGTCACTGCTAGAGCCAGCAACTGTGGACATATTTCATACAAGCACACTGAACCTTCTAGTACTAGTGAAGAACGAAAGAAGAGCTGGGACATGGTTGTAGATACTGCTTCCCTTCTGAACAAGGAGTCAAGAAAGGCTTTGCAGCTTTTACAAGGTCTCAAGGGGACTCATTTAATCATTCCACAATCAGGTACAAATGAGTATCATATGccttgttattttgttttaaattggttCTCAATGATGacacttttgttttgtttgttagtCATAAGAGAATTGGGAAGCATTAAACAacaatttggaatttttagaaAGACTTCAGAGGCTGATTTGGCCTTGAAATGGATTGAAGAATGCATGAGGAATTCAAATTGGTGGATTCATATCATTGACTGTGCTTTTCCTATGGTTGAAGATCACATCCTTGACTGTGCTCTTGAATATAGAAGAAAAGATAATGTTGGACAAGTTGTCCTTCTCAGTGATGATATCATCTTGAAAATCAAATCCATGGCAAAGGGGTTGCTATGCGAGACAGTGCAGCAATTTCGTCAGAGTTTAGCAAACCCTTTCTCTGAGAGGTTTATGTGGGGTAACAGCTTTCCAAGAGGACTGACTTGGTCTTGCCAAGATGATGTGGTTTTAAGAGAGAAATATTGTTGTTTGCCATCAAAGGCTGGTCTGAAGCTCCTTGTCACTTAA 3168 0.3706 MASIADNPNPNPNQEPEDSIIPVLTVFKNKSILKNIFIVLNNNDNDDNNNNNDHTLLVGRHPNCNIVLTHPSISRFHLQIRFTPSSRSISLLDLSSVHGTWVSGRKLEHGVSVELKEGDSFQLGVSSRIYLLHFVSKFDADALKKIGSLSCDDEKKNQSKDETFEVDNDSCGNEKSCCDGQNCFLSPPYVQSVDESGNTQINEACPDVEMPEETNLLGALRECFKHNICILGPKLNQHSSAEKQRINPEVSFDEKDDAAVDVISKESDFEVTFEDTDKIEDILTTGSRVFDSEDMTYSESHPTNSDAELSADSLSDREEQGNCGEKYETELQNLNANCVEKGYSLNEIVEDIEKMCIENTDPASFDENGVASVKVEPREHKLEFFFEENVRIDDILTSVARLFISENTSSLTEEAIPVINFQQIKIVEEVGVDSISDGEKENKGDKELQAYLNVKPCDEEGSSLDETVEDTVKSFQIESLNPSVTQEPDLEITDKKENQTLQSPVALDGNIDVGILERSCIEESAKGSSTFGSDEEGSSLDETYEDTVKSLQTESLNPSVTQEPDLEITDKKVNQTSQSLVAVDGNIDVGTFGSDILSKRDKAASAPQDRTRKSRLLNTPNVGTKFVMSNLKDIDITNKPMPKDIFSDIFSVWDEVEMFTPNKENSSIPTNTFHMQFMGKKGVLDESKSSKSQRSHNLKASFSPIIYSAERSASPISNKENQTPREAQEWKSQRSHNLNANFSPIIYSAERSTSAISNKENLTPREALKWMSGRKPLECHDTTELGKKRVERRPLQSLMNSGGNFNSRISSPLSAAKSIVGVTARASNCGHISYKHTEPSSTSEERKKSWDMVVDTASLLNKESRKALQLLQGLKGTHLIIPQSGTNEYHMPCYFVLNWFSMMTLLFCLLVIRELGSIKQQFGIFRKTSEADLALKWIEECMRNSNWWIHIIDCAFPMVEDHILDCALEYRRKDNVGQVVLLSDDIILKIKSMAKGLLCETVQQFRQSLANPFSERFMWGNSFPRGLTWSCQDDVVLREKYCCLPSKAGLKLLVT 1055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04189 1055 CDD FHA 22 127 IPR000253 GO:0005515
Tsu01g04189 1055 Pfam PIN domain 853 1002 IPR002716 -
Tsu01g04189 1055 SUPERFAMILY SMAD/FHA domain 51 135 IPR008984 GO:0005515
Tsu01g04189 1055 Gene3D - 847 1010 - -
Tsu01g04189 1055 MobiDBLite consensus disorder prediction 293 323 - -
Tsu01g04189 1055 PANTHER FHA DOMAIN-CONTAINING PROTEIN PS1 737 1054 - -
Tsu01g04189 1055 PANTHER FHA DOMAIN-CONTAINING PROTEIN PS1 11 735 - -
Tsu01g04189 1055 PANTHER TRANSMEMBRANE PROTEIN 18 737 1054 - -
Tsu01g04189 1055 PANTHER TRANSMEMBRANE PROTEIN 18 11 735 - -
Tsu01g04189 1055 MobiDBLite consensus disorder prediction 293 310 - -
Tsu01g04189 1055 SMART FHA_2 55 107 IPR000253 GO:0005515
Tsu01g04189 1055 Gene3D - 2 135 - -
Tsu01g04189 1055 MobiDBLite consensus disorder prediction 712 735 - -
Tsu01g04189 1055 Pfam FHA domain 57 124 IPR000253 GO:0005515
Tsu01g04189 1055 ProSiteProfiles Forkhead-associated (FHA) domain profile. 56 107 IPR000253 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04189 - - cam:101515102 979.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04189 01 49780406 49784679 Tsu01g04189 01 49780406 49784679 ECH