Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03837 atgactGAAATTACTATGAAGAATCAAACTTCACAGTCACACTGGTGGTGGCTTGATGAAAACACCACCGTTAGAAGATCAATATGGCTTCAATCTACACTCACTGAGCTGAATGAGAAGACAAAGGCAATGTTAAAATTAATTGAAGGAGAAGCAGATTCTTTCGCACAACGAGCTGAGATGTTTTACAAGAAGAGACCAGAACTTGTGAGCATCGTTGAAGATTTCTATAGGACACACCGCTTGTTAGCTGAACGGTATGATCAAGTCAGACCTGAATCCGGAATTCGCCTGGTAACTCCAATCGGTTCATTTAATCATTCTCAATCAGAGAAGTTGAGGAGTTTTGATGATGATCGTGGTTATGATAGCTATTCTGAGAATTGTGATGTAGAGGAGTCTGTGGAATCTGAAATTGATGATCCTGAGCACGAAGAGGAAGAACATGAGGAAGTTCGATCTGTGGCTGCAAATGACGTGATGAAGCTGAGGAAGGAAATTGAGATacttggtgaaaagaagaaggtTCATAAGGATCAAATCAAGCAAAAAGATGACATACTTGATGTAATGAAGTTGAGGGAAGAAATAGAGCGACACGAGAATGAAGCACATAAGGATGAACTCAAGCAGGAAAATACCATTTCTAATGAAGTAGTAATGAAGTTGACGGAAGAAATGGAACAATTCAAGCTGAAAGATACCATTCGCGATCAAGTAATGAAGTTGAGGGAAAAGATAGAACGACttgagaaagaaaatgaagCGCAGAAGGATGAACTCATGCAGAAAGATGCCATTTGCAATGAAGTAACAAAGTTGAGGGAAGAGATAGAACAACATGAGAAAAAGAATGAAGCACAGAAGGATGAAACCGAGCAGAAAGATGCCGTTTGCGATGAAGTAATGAAGTTGAGGGAAGAGATAGAACGACTTGAGAAAGAGAATGAAGCACTGAAGAATGAACTCAAGCAGAAAGACACCATTTCTAATGAAGTAATGAAGTTGAGGGAAAAGATAGAGCGACTCGAGATAGAGAATGAAGCGCAAAAGAATGAACTCAAGCAGAAAGACACTGTTTCTAATGAAGTAATGAAGTTGAGGGAAGAGATAGAGCGACTCGAGAAAGAGAATGTAGCACAGAAGAATGAACTCAAGCAGAAAGACACCATTTCTAATGAAGTAATGAAGTTGAGGGAAAAGATAGAACAActtgagaaagagaaagaagcaCAGAAGAATGAACTCAAGCAAAAAGACACTGTTTCTAATGAAGTAATGAAGTTGAGGGAAAAGATAGAGCGACTCGAGAAAGAGAATGAAGCACAGAAGGATGaactgaagaagaaaaacacCATTTGTGTTGAAGTAATGAAGTTGAAGGAGGAAATAGAACAACTCAAGAAAGAGAATGAAGCACAAAAGGATAAACTCAAGCAGAACGCTACAATTTGCAATGAAGTAATGAAGTTTAGGGGAGAATTAGAAACACACAAAAAAGAGAATGAAGCTCAGAAAGATGAACTCAAGGAGAAAGATACCATTTGTGATGAAGTAATGAAGTTGAGGAAAGAGATAGAACGACTCGAGAAAGAGAATGAAGCACAGAAGGATGAACTCAAGGAGAAGCATATCATTTGCAATGAAGTACTGAAGTTGAGAGAAGAATTAGAAAGTCACAGGGAAGAGAATGAAGCTCAGAAAGAGGAACTCATGCATAAGTTTACCATTTATGATGAAGTAATGATATTGAAGGAAGAAAGGGAGAGTTTTAGAGAAGAGAATAGGACACAAAAGGATGATCTGAAACAGAAAGACAAAGAGAAAATAGAGGTAATAAGACAGCTCAGTTCAACAATAGATTTGCTGAAGCAGGAGAATGTAAAGATGAGAAACTTCATAGCTAAGGAATCTGCTAAAAAATGGAAGACACCATTTAAATTCAACAAACTCATTGGAACATTCTCAGAGAAATTGCTTAATGGGATTCCAAAGAATAAGCCTAGTCTTGTAGCTCTCTAG 2022 0.3655 MTEITMKNQTSQSHWWWLDENTTVRRSIWLQSTLTELNEKTKAMLKLIEGEADSFAQRAEMFYKKRPELVSIVEDFYRTHRLLAERYDQVRPESGIRLVTPIGSFNHSQSEKLRSFDDDRGYDSYSENCDVEESVESEIDDPEHEEEEHEEVRSVAANDVMKLRKEIEILGEKKKVHKDQIKQKDDILDVMKLREEIERHENEAHKDELKQENTISNEVVMKLTEEMEQFKLKDTIRDQVMKLREKIERLEKENEAQKDELMQKDAICNEVTKLREEIEQHEKKNEAQKDETEQKDAVCDEVMKLREEIERLEKENEALKNELKQKDTISNEVMKLREKIERLEIENEAQKNELKQKDTVSNEVMKLREEIERLEKENVAQKNELKQKDTISNEVMKLREKIEQLEKEKEAQKNELKQKDTVSNEVMKLREKIERLEKENEAQKDELKKKNTICVEVMKLKEEIEQLKKENEAQKDKLKQNATICNEVMKFRGELETHKKENEAQKDELKEKDTICDEVMKLRKEIERLEKENEAQKDELKEKHIICNEVLKLREELESHREENEAQKEELMHKFTIYDEVMILKEERESFREENRTQKDDLKQKDKEKIEVIRQLSSTIDLLKQENVKMRNFIAKESAKKWKTPFKFNKLIGTFSEKLLNGIPKNKPSLVAL 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03837 673 Coils Coil 183 226 - -
Tsu01g03837 673 Pfam KIP1-like protein 15 88 IPR011684 GO:0003779
Tsu01g03837 673 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 13 94 IPR011684 GO:0003779
Tsu01g03837 673 PANTHER PROTEIN NETWORKED 4A 543 672 - -
Tsu01g03837 673 PANTHER PROTEIN NETWORKED 4A 12 291 - -
Tsu01g03837 673 Coils Coil 160 180 - -
Tsu01g03837 673 MobiDBLite consensus disorder prediction 129 147 - -
Tsu01g03837 673 Coils Coil 233 484 - -
Tsu01g03837 673 Coils Coil 581 608 - -
Tsu01g03837 673 PANTHER PROTEIN NETWORKED 3A-RELATED 543 672 - -
Tsu01g03837 673 PANTHER PROTEIN NETWORKED 3A-RELATED 12 291 - -
Tsu01g03837 673 MobiDBLite consensus disorder prediction 110 149 - -
Tsu01g03837 673 Coils Coil 488 574 - -
Tsu01g03837 673 MobiDBLite consensus disorder prediction 111 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03837 Tsu-Chr1 46191179 46194207 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03837 - - vun:114191805 567.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03837 01 46191179 46194207 Tsu01g03837 01 46191179 46194207 ECH
Tsu07g04181 07 47496940 47499654 Tsu01g03837 01 46191179 46194207 PCT