Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03676 ATGGATGATATTCCAAAAGGGTTATGTGGATGGAGTTGGAAAGAGAACAAATTGTTCGAGTTGGCTTTAGCTTTGGTAGATGAGAGTCACCCGAAACGGTGGGAGATGGTTGCAGAAATGGTTGGAGGAAAAAAGAGTGCAGTAGAAGTTCGAGAACATTATGTGATACTTTTGGAGGATTTGGAGCTTATAGAATCTGGAAAATTTGATCATAAATTAGGAGAAGATCATACATGTGTTATTGTTGACCTTACTAAGTCCTTATGTTTGTCtgataataatattgattga 291 0.3574 MDDIPKGLCGWSWKENKLFELALALVDESHPKRWEMVAEMVGGKKSAVEVREHYVILLEDLELIESGKFDHKLGEDHTCVIVDLTKSLCLSDNNID 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03676 96 CDD SANT 11 58 IPR001005 -
Tsu01g03676 96 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 94 IPR044636 GO:0003700
Tsu01g03676 96 SUPERFAMILY Homeodomain-like 11 65 IPR009057 -
Tsu01g03676 96 Gene3D - 9 71 - -
Tsu01g03676 96 SMART sant 7 60 IPR001005 -
Tsu01g03676 96 PANTHER PROTEIN RADIALIS-LIKE 3 1 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03676 Tsu-Chr1 44517914 44518204 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03676 - - mtr:MTR_1g086180 174.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04335 07 48647726 48648139 Tsu01g03676 01 44517914 44518204 PCT