Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03638 ATGGAGTTCCAAATTTTGGTGTTGCCATTTTTCATAGTGTCTTTGATTATTCTTCAATATGGAGATTGTCAAGGAATGAATATTAGTACCAATGTTGTTCAAAGAAAAGgcacacattttattttaaatgggAAGCCACATTATATTAATGGATTCAATTCCTATTGGTTAATGACCATGGCATCTAACCCATCTACAAGGTTCAAGGTCACTTCCACATTTGAACAAGCTTCTAAACATGGTTTAAATGTAGGAAGAACAATGGCTTTCAATGATGGTGTCCTTCAGATCTCTCCTGGTTCTTATGATGAAAATGTTTTCAAGGGATTGGATTTTGTGATAGCTGAGGCAAGAAAATATGGAGTGCAACTTATACTAAGCTTGGTGAATAATTGGGAAAATTTGGGTGGCAAAAAGAAATATGTCCAATGGGCAAGAGAACGTGGTCAAAATGTCAAAAATGATGACGACTTCTTTACAAACTCTGTTGTTAAGcaatattacaaaaattatgTTAAGACTGTACTAACAAGAAATAATACTATAAATGGAATGTTATATAAGGATGACCCAACTATTTTTGCTTGGGAGCTTATTAATGAACCTGAGTGCCAAGATAACTCCTCTGGAAAATCAATTCagAATTGGGTTAATGAGATGGCGGTGTATGTGAAATCCATTGATAGCAACCATTTGCTTGAAATAGGACTTGAAGGATTCTACGGTGAAACAATGCCACAAAAGAAGCAATTCAATCCTAACTCTTTTCCGGTCGGAACCGATTTTATCTCCAACAATCAAATTCCTCAAATCGATTTTACCACCATTCATGTATACCCTGACACATGGTTACCACCAGACTCAAATGAGACAACTAAAAGTGTATTTGTAGACAAATGGATAGAAGCACATATTGAAGACTCAAATACTATACTAAAAAAGCCAATTATTATAGGAGAGTTTGGAAAGTCTTCAAAGACACCTGGATATAACATAGCTGTAAGAGATAATTACTATAAGAAAATATACAACGCCATATCTACAAGTGCTATTAGTGAAGGCTCATGTGCAGGTGGGATTTTCTGGCAACTACTGTCTCAAGGAATGGATAGCTATGGAGATGGCTTTGAAGTCATTTTTGAGAATAGTCCTTCAACTGCTGAAATCATCAAATTACAATCtattaaaatgtcaaatatcaaATAG 1206 0.3367 MEFQILVLPFFIVSLIILQYGDCQGMNISTNVVQRKGTHFILNGKPHYINGFNSYWLMTMASNPSTRFKVTSTFEQASKHGLNVGRTMAFNDGVLQISPGSYDENVFKGLDFVIAEARKYGVQLILSLVNNWENLGGKKKYVQWARERGQNVKNDDDFFTNSVVKQYYKNYVKTVLTRNNTINGMLYKDDPTIFAWELINEPECQDNSSGKSIQNWVNEMAVYVKSIDSNHLLEIGLEGFYGETMPQKKQFNPNSFPVGTDFISNNQIPQIDFTTIHVYPDTWLPPDSNETTKSVFVDKWIEAHIEDSNTILKKPIIIGEFGKSSKTPGYNIAVRDNYYKKIYNAISTSAISEGSCAGGIFWQLLSQGMDSYGDGFEVIFENSPSTAEIIKLQSIKMSNIK 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03638 401 Pfam Cellulase (glycosyl hydrolase family 5) 43 351 IPR001547 GO:0004553|GO:0071704
Tsu01g03638 401 PANTHER - 11 400 IPR045053 GO:0004553
Tsu01g03638 401 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE 1 11 400 - -
Tsu01g03638 401 Gene3D Glycosidases 29 401 - -
Tsu01g03638 401 SUPERFAMILY (Trans)glycosidases 32 386 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03638 Tsu-Chr1 44207960 44209742 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03638 28 401 Glycoside Hydrolase AT1G02310 55.497 5.81e-155 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03638 K19355 - gmx:100791612 542.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03638 01 44207960 44209742 Tsu01g03638 01 44207960 44209742 ECH