Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03637 ATGGGGTTCCAAATTTTAGTATTAACATATTTTCTAATGTCTTTGATTATTGTTCAACATGGGAATTGCCAAAGAGTTAAGGTTGGTACCGATTTTGTTCAAAGAAAtggtacacattttattttgaatggAAAACCACATTATGTGAATGGATTCAATTCCTATTGGTTAATGATCTTTGCATCTGACCCATCTACAAGGTATAAGGTTACTTCCACTTTTCAACAAGCTTCTAAATATGGTTTAAACCTAGGAAGAACATGGGCATACAATGATGGAGATTATAAAGCACTTCAAATTTCTCCTGGTTCTTACGACGAAAATGTCTTCAGGGCATTGGATTTTGTGATATCAGAGGCAAGAAAATATGGAGTGCAACTAATACTTGGTTTGGTGAATAATTGGGAAAATTTGGGAGGCAAAAAGAAATATGTGCAGTGGGCAAGAGAACGTGGTCAAAGTGTCAAAAATGATGATGACTTCTTTACAAACTCCGTTGTTAAGCAATATTACAAAAATCATGTTAAGGCTGTGTTGACAAGAAAGAACAGTTTAACTGGGGTGTTATACAAGGATGATCCAACTATTTTTGCTTGGGAACTTATTAATCAACCTCGTTATGCAAATGACACTTCCGGAAAATCAATTCAGAATTGGGTCAGTGAGATGGCAGCCTATGTTAAATCCATTGATAGCAACCATTTGCTCGAAATAGGACTTGAAGGGTTCTATGGTGAAATAATGCCACAAAAGAAGCAATTCAATCCCAATTCTACTCAAGTTGGTACTGATTTTATCTCAAACAATCAAGTTCCTGAAATCGATTTTGCCACCATTCATATATACCCTGATCAATGGTTACAAGGTTCAAACGAGGCAactcaaaatatatttgttgacaAATGGTTAGAAGCTCATATTGAGGACTCAAATACTGTTTTAGGAAAACCCATTATTGTAGCAGAGTTTGCAAAATCTTCAAAGTCACCTGAATATAGCATTGATAAAAGAGACAATTACTTTAAGAAAATATATGATACCATATCTACAAGTGCTATTAGTGGAGGCTCATGTGCAGGTGGAATTTTCTGGCAACTCATGCCTCAAGGATTGGATAAGTATGGAGATGGCTATGAAGTTATTTTTGAGAATAGTCCTTCAACTGTTGAAATCATCAAACAACAATCTATAAAGATGTCAAGGGTGACTTCTAACAGGGAAGAGTTCATCAAGTCTACCACCAAGGTGCACAACTTGTGA 1260 0.3468 MGFQILVLTYFLMSLIIVQHGNCQRVKVGTDFVQRNGTHFILNGKPHYVNGFNSYWLMIFASDPSTRYKVTSTFQQASKYGLNLGRTWAYNDGDYKALQISPGSYDENVFRALDFVISEARKYGVQLILGLVNNWENLGGKKKYVQWARERGQSVKNDDDFFTNSVVKQYYKNHVKAVLTRKNSLTGVLYKDDPTIFAWELINQPRYANDTSGKSIQNWVSEMAAYVKSIDSNHLLEIGLEGFYGEIMPQKKQFNPNSTQVGTDFISNNQVPEIDFATIHIYPDQWLQGSNEATQNIFVDKWLEAHIEDSNTVLGKPIIVAEFAKSSKSPEYSIDKRDNYFKKIYDTISTSAISGGSCAGGIFWQLMPQGLDKYGDGYEVIFENSPSTVEIIKQQSIKMSRVTSNREEFIKSTTKVHNL 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03637 419 Gene3D Glycosidases 29 403 - -
Tsu01g03637 419 PANTHER - 10 402 IPR045053 GO:0004553
Tsu01g03637 419 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE 1 10 402 - -
Tsu01g03637 419 SUPERFAMILY (Trans)glycosidases 32 392 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03637 Tsu-Chr1 44196291 44205689 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03637 23 399 Glycoside Hydrolase AT1G02310 55.352 1.72e-158 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03637 K19355 - gmx:100791612 568.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03637 01 44196291 44205689 Tsu01g03637 01 44196291 44205689 ECH