Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03548 ATGGACTCTGATTCTTCTTGGACTGCTCGTCTCTCTTCCGCCTCTAGACGTTATCAAGCCGCTCTTCAATCTCGATCAgATATGTTTATGGGTTTCGACGAAAACGAAGCGGATGAAGATATTAGGGAAGAGTTTCTGTGTCCATTTTGTTCCGAGTATTTTGATATTGTTGGATTGTGTTGCCACATTGATGAAGAGCATCCAATGGAggcaaaaaatgggGTATGTCCAGTTTGTGCATTGAGGGTGGGGGTTGATATGGTCGCGCACATAACCCTACAACATGGAAGTATATTTAAGATGCAGCGCAAGAGGAAATCGCGGAAAGGTGGATCATATTCAACGCTTTCTTTATTGAGGAAGGAGCTGAGAGAAGGAAATTTACAATCCCTTTTTGGCGGGTCTCCGTGTATAGTGTCCTCGTCTAATGTAGCAGCTGATCCGCTGCTGGATTCATTTATATCGCCTTTAAATCATGAATCTGTGAGTTCTCAGTCTCACGCACATAACGAGACAAGATCATCCAAGAAAATCTCAGATGAGACTGTATCAAAAAGCCATGTGGCGACACCAACCATGTCAGTTAAGGATAAGGAGGAGAAGACGAAAAGATGCGAGTTTGTTCAAGGGCTGTTGATGTCCACCATACTTGATGAtgatttatga 666 0.4189 MDSDSSWTARLSSASRRYQAALQSRSDMFMGFDENEADEDIREEFLCPFCSEYFDIVGLCCHIDEEHPMEAKNGVCPVCALRVGVDMVAHITLQHGSIFKMQRKRKSRKGGSYSTLSLLRKELREGNLQSLFGGSPCIVSSSNVAADPLLDSFISPLNHESVSSQSHAHNETRSSKKISDETVSKSHVATPTMSVKDKEEKTKRCEFVQGLLMSTILDDDL 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03548 221 MobiDBLite consensus disorder prediction 161 197 - -
Tsu01g03548 221 Pfam Drought induced 19 protein (Di19), zinc-binding 43 96 IPR008598 -
Tsu01g03548 221 PANTHER PROTEIN DEHYDRATION-INDUCED 19 HOMOLOG 4 1 219 - -
Tsu01g03548 221 PANTHER PROTEIN DEHYDRATION-INDUCED 19 1 219 IPR033347 -
Tsu01g03548 221 Pfam Stress-induced protein Di19, C-terminal 116 216 IPR027935 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03548 Tsu-Chr1 43431076 43434357 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03548 - - gmx:100795155 384.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03548 01 43431076 43434357 Tsu01g03548 01 43431076 43434357 ECH
Tsu07g01785 07 17641623 17645022 Tsu01g03548 01 43431076 43434357 ECH