Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03359 ATGGCTAACCACGATATGATATTTGGTGAAAATAACAATTTGGAACATGGTCATGACCAGCAGTCCGCGCTTGATCATGATCATAATTTGGGCCACGGTGAAAACCATGCATTGGAACTTGGATCAGTCCATGAACATCATTTGGGCTTGGGAGAAACCCATGATTATGAATTGGCCATGGAACCCATCGATGAACACGAATTCAGGTTGGCACAAAAGCATGATCAGGATGGTCAAACTTATGAGCATGACCATAAGCCATCAATGGATAAAAAACCTGAACATGATGCTGACCATGATGAGTTGTCCTTTCCTGGACAAAACCATGAGTCGGTCCTATCGGAGAACAATGATCTGACTGTTTCGGGAAGCCAAGGACTTGATGAGAGCATGGACCCGACTGTGGTTCAGAACCCAGAAATGAGCATTGTTTCTGCCGATGATATGGGTGTTTATCAGTCACAGTATATAGTTCCTTCTACACCCCATGTAATTCAGTCTCGTAAAGTTGATGTCAATCCAACTTATGAATTGTCGGTCGGCCAAGAATTTCCCGATGTCAAGAGTTGCCGAAGAGCATTGAGGGATACAGCAATTGCTCTGCACTTTGAGATGCAGACTATAAAATCAGACAAGACACGCTTTACTGCAAAATGTGCTAGTGAAGGATGTCCTTGGCGCATTCATGCTGCAAAGCTCCCAGGTGTACCGACTTTTACTATCAGGACAATTCATGAGAGTCATACATGTGGAGGAATTTCTCATCTTGGTCATCAGCAAGCTTCAGTTCAGTGGGTTGCTACCTCTGTGGAGCAAACACTGAAGGAGAACCCTAATTGCAAGCCAAAGGAGATATTGGAAGAGATTCATAGGGTTCACGGTATCACCTTATCTTACAAGCAAGCATGGAGAGGCAAGGAGCGTATTATGGCTGCAATTCGTGGATCTTTTGAAGAAGGGTATCGCTTACTTCCACAATACTGTGCACAGGTTAAACGCACAAACCCAGGCAGTATTGCATCTGTTTATGGAAATCCATCTGATAATTGCTTCCAACGcctatttatttcttttcaagcatctatttatggatttttaaatgCTTGTCGGCCACTCTTGGGGCTTGATAGAACATATCTGAAGAGCAAGTATCTTGGTACATTACTTCTTGCTACTGGATTTGATGGTGATGGGGCTCTCTTTCCTCTTGCATTTGGTGTTGTTGATGAGGAGAGTGATGATAATTGGATGTGGTTTCTCTCTGAACTTCATAACCTGCTTGAGGTTAATACTGAGAACATGCCAAGGCTTACTATTTTGTCTGATAGACAGCAGGGAATTGTGGATGGTGTTGATGCGAATTTTCCTACTGCTTTCCATGGCTTTTGTATGTGCCACTTGAGTGACAGCTTCCGTAAGGAATTTAATAACACCATGCTGATCAATCTTCTATGGGAAGCATCCAATTGTCTTActataattgaatttgaagCTAAAGTTTTGGAAATTGAAGAGATATCACAAGATGCTGCATATTGGATTCGAAGAGTTCCACCACGTCTGTGGGCCACTGCTTATTTTGAAGGGCAAAGGTTTGGCCATACAACAGCCAACATAGTTGAAGCTTTAAACAGTTGGATATTAGAGGCATCTGGGCTACCAATAATTCAAATGATGGAATGCATTAGAAGACAGCTAATGACTTGGTTCAATGATCGCCGAGAAACTAGTTTACAGTGGTCATCCATACTTGTTCCTTCTGCTGAGCGGCATGTTGCGGAGGCCCTTGAATGTGCACGCACTTATCAGGTTCTTCGTGCCAACGAAGCTGAGTTTGAAGTTATATCTCACGAGGGAACTAATATAGTTGATATAAGGAATCGCTGCTGTCTTTGTCGTGGTTGGCAGCTTTATGGTTTGCCCTGTGCACATGCTGTGGCAGCACTTCTATCCTGCAGGCAGAATGTTCATAGATTCACAGAAAGCTGTTTCACTGTTGCAACCTATCGCAAGACATACTCACAAACCATACATCCAATTCCCGACAAATCTGTCTGGAAGGAGTTGTCTGAGGGGGATGCCAATGTTAGCCAAGTTCTTGAAGTTGTTATTAACCCTCCTAAATCACTCAGACCACCTGGACGGCCAAGAAAGAAGAGAGTTCGTGCAGAAGATCGCGGGCGTGCTAAACGATTGGTGCATTGTAGTCGCTGCAATCAAACAGGTCACTTTAGAACCACATGTGCTGCCCCCATCTAA 2259 0.4276 MANHDMIFGENNNLEHGHDQQSALDHDHNLGHGENHALELGSVHEHHLGLGETHDYELAMEPIDEHEFRLAQKHDQDGQTYEHDHKPSMDKKPEHDADHDELSFPGQNHESVLSENNDLTVSGSQGLDESMDPTVVQNPEMSIVSADDMGVYQSQYIVPSTPHVIQSRKVDVNPTYELSVGQEFPDVKSCRRALRDTAIALHFEMQTIKSDKTRFTAKCASEGCPWRIHAAKLPGVPTFTIRTIHESHTCGGISHLGHQQASVQWVATSVEQTLKENPNCKPKEILEEIHRVHGITLSYKQAWRGKERIMAAIRGSFEEGYRLLPQYCAQVKRTNPGSIASVYGNPSDNCFQRLFISFQASIYGFLNACRPLLGLDRTYLKSKYLGTLLLATGFDGDGALFPLAFGVVDEESDDNWMWFLSELHNLLEVNTENMPRLTILSDRQQGIVDGVDANFPTAFHGFCMCHLSDSFRKEFNNTMLINLLWEASNCLTIIEFEAKVLEIEEISQDAAYWIRRVPPRLWATAYFEGQRFGHTTANIVEALNSWILEASGLPIIQMMECIRRQLMTWFNDRRETSLQWSSILVPSAERHVAEALECARTYQVLRANEAEFEVISHEGTNIVDIRNRCCLCRGWQLYGLPCAHAVAALLSCRQNVHRFTESCFTVATYRKTYSQTIHPIPDKSVWKELSEGDANVSQVLEVVINPPKSLRPPGRPRKKRVRAEDRGRAKRLVHCSRCNQTGHFRTTCAAPI 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03359 752 MobiDBLite consensus disorder prediction 11 34 - -
Tsu01g03359 752 SMART 26again6 628 655 IPR006564 GO:0008270
Tsu01g03359 752 MobiDBLite consensus disorder prediction 73 112 - -
Tsu01g03359 752 MobiDBLite consensus disorder prediction 707 728 - -
Tsu01g03359 752 Pfam MuDR family transposase 178 241 IPR004332 -
Tsu01g03359 752 MobiDBLite consensus disorder prediction 73 105 - -
Tsu01g03359 752 MobiDBLite consensus disorder prediction 19 34 - -
Tsu01g03359 752 Pfam MULE transposase domain 373 468 IPR018289 -
Tsu01g03359 752 PANTHER POLYPROTEIN, PUTATIVE-RELATED 88 751 - -
Tsu01g03359 752 ProSiteProfiles Zinc finger SWIM-type profile. 612 653 IPR007527 GO:0008270
Tsu01g03359 752 PANTHER OS12G0597300 PROTEIN 88 751 - -
Tsu01g03359 752 Pfam SWIM zinc finger 602 652 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03359 Tsu-Chr1 41578332 41581279 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03359 - - gmx:100811471 1306.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03359 01 41578332 41581279 Tsu01g03359 01 41578332 41581279 ECH