Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03301 ATGGATATGGTTGGAAGAAAGAGAAGGTTTCTCTGTTCTACTCTGCATCTTCCTCTTATGATTTTCTTCATGGTAATACTTCTACAAAAGGGTAGTATTATGGCTGAATCAAGCATGTTAAATTACACAAAGTATAGACAAATTAGTAGGTTGAGGCTTGAAAGGATTAATAATCACTTGGACAAGATTAACAAGCCTCCTGTTCTCACCATTGAGAGCCCAGATGGAGATCTTATTGATTGTGTtcacaaaagaaaacaattagCTTTGGATCACCCACTTTTAAAGAATCACAAGATCCAGAAAACGCCAAGTGACATGCCAAAAGGGATGAAAGTGAAGAGAGATGACAATGCCGGTAGTAATGACACCAATGCTAGCGATATGAAGGCAGGAGAAGGGAAAGGGAGGGTAAGAGAAGACTCGTGGCAAATGTGGCATCGAAATGGAACACGGTGCCCAAAAGGAACAGTTCCAATTCGGAGGAGTACCGTGCATGATGTTTTGAGAGCAAAATCTTTGTATGACTATGGTAAGAAACGTCAACAAATTCCACTATCCCGCCACAGTGAGACCCCCAATGTACTTGGCGGCAATGGCCATGAGCATGCGATCGCATACACAGGATCATCGCAAGAGATTTACGGTGCAAAAGCATCGATAAGCGTGTGGGATCCATCTATTGAAGTGATGAACGAGTTCAGCCTCTCGCAAATTTGGGTTCTTTCAGGATCTTTCGATGGTCCTGATCTTAACAGCATCGAAGCTGGATGGCAGGTCAGTCCGGAGCTTTATGGTGACAGCAGACCCAGATTATTCACTTATTGGACGAGTGACTCTTATCAAGCAACAGGATGTTACAATCTTCTTTGTGCTGGTTTCATTCAAACAAATAACAAGATTGCTATTGGAGCTGCCATTTCTCCTGTCTCTTCTTATGCTGGCAGCCAATATGACATTTCAATCCTCATTTGGAAGGATCCAAGAGTAGGAAATTGGTGGATGAGTTACGGCGACAACACATTGGTAGGGTATTGGCCAGCGGAGCTATTCACACACTTAGCCGATCACGCCACAATGGTAGAATGGGGTGGTGAGGTAGTAAACTCGCGGTCCAATGGCCGACACACCTCCACCCAGATGGGTTCCGGTCACTTTGCCGAAGATGGTTTCGGAAAAGCAAGCTACTTTCGAAACCTCGAGATTGTAGACATTGATAACACTCTTAGCTCAGTACAAAGTATCTCAACCTTAgctgaaaacaaaaattgttatgATATTGAAAACTCCTATAGCAATGAATGGGGTACATACTTTTATTATGGTGGACCTGGGAATAATCCTCAGTGTCCATGA 1356 0.4233 MDMVGRKRRFLCSTLHLPLMIFFMVILLQKGSIMAESSMLNYTKYRQISRLRLERINNHLDKINKPPVLTIESPDGDLIDCVHKRKQLALDHPLLKNHKIQKTPSDMPKGMKVKRDDNAGSNDTNASDMKAGEGKGRVREDSWQMWHRNGTRCPKGTVPIRRSTVHDVLRAKSLYDYGKKRQQIPLSRHSETPNVLGGNGHEHAIAYTGSSQEIYGAKASISVWDPSIEVMNEFSLSQIWVLSGSFDGPDLNSIEAGWQVSPELYGDSRPRLFTYWTSDSYQATGCYNLLCAGFIQTNNKIAIGAAISPVSSYAGSQYDISILIWKDPRVGNWWMSYGDNTLVGYWPAELFTHLADHATMVEWGGEVVNSRSNGRHTSTQMGSGHFAEDGFGKASYFRNLEIVDIDNTLSSVQSISTLAENKNCYDIENSYSNEWGTYFYYGGPGNNPQCP 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03301 451 MobiDBLite consensus disorder prediction 100 138 - -
Tsu01g03301 451 Pfam Neprosin activation peptide 70 207 IPR025521 -
Tsu01g03301 451 MobiDBLite consensus disorder prediction 100 121 - -
Tsu01g03301 451 Pfam Neprosin 232 444 IPR004314 -
Tsu01g03301 451 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 17 449 - -
Tsu01g03301 451 Gene3D - 226 343 - -
Tsu01g03301 451 PANTHER CARBOXYL-TERMINAL PEPTIDASE 17 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03301 Tsu-Chr1 40910003 40914257 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03301 - - gmx:100808774 744.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03301 01 40910003 40914257 Tsu01g03301 01 40910003 40914257 ECH