Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03291 atgcattcatgttaCAGTTACGGTTACAACTACATTCCGTTCAAATTAAACCGTTTAACTCCCCGAACCGTTCCGGTTCGAGCAGCCGTTACTTCACCGGAGAAGCGGTCCAGAAAGAAGAAACCGGCGAAAGATGATGACAGTTCGCTTGAGAACAGTCTCCGGTTCAGTTTCATGGAGGAACTCATGCACCGGGCTAAGAACCGTGACTCAACCGGTGTTTCTCAAATTATGTATGATATGATTGCTGCTGGTTTAAGTCCTGGTCCAAGATCGTTTCACGGTTTGGTTGTTTCTTATGCTCTTAACGGCGATGAACAAGCCGCGATGGATTCACTGAGGAGAGAATTAGGTGCAGGACTTCGGCCGATTCATGAAACTTTTGTTACATTGGTAAGATTGTTTGGGTCTAAAGGCCATGCTACTAAAGGATTAGAGATACTTGGAGCTATGGAAAAGCTAGATTATGATATTCGTCATGCTTGGCTAATTCTTATTGAGGAACTTGTTCGGAACAAGCATTTGGAAGATGCAAACAAAGTGTTCTTGAAGGGATCTAAGGGTGGCCTCAGGGCTACTGATGAAGTTTATGATCTTCTAATTGAGGAAGACTGCAAAGCGGGAGACCATTCTAATGCTTTAGAAATTTCCTATGAGATGGAAGCTGCTGGGCGAATGGCaacaacattccattttaattGCCTCCTTTCTGTGCAGGCTACCTGCGGAATACCTGAAATAGCCTTTACAACATTTGAGAACATGGAATATGGAGAAGATTATATGAAGCCTGATACAGAAACATACAATTGGGTCATTCAAGCGTATACTAGAGCTGAATCTTACGACAGAGTACAAGATGTCGCTGAGTTGCTTGGCATGATGCTTGAAGATCATAAGCGTGTACAGCCAAATATGAAGACCCATGCGCTGTTAGTTGAGTGTTTTACCAAGTACTGTGTAGTACGAGAAGCTATCAGGCATTTCCGAGCACTTAAAAACTTTGAAGGGGGCACAAAAGTCCTACATAATGAAGGGAACTATGGAGATCCTCTTTCTTTGTACCTTCGGGCATTGTGTCGGGATGGAAGGATTATTGACTTGCTTGAAGCTTTAGAAGCTCTGGACAAAGATAACATGCAAATCCCCCCACGGGCAATGATCTTGAACAGAAAATACCGGACATTAGTGAGCTCATGGATTGAACCTTTACAAGAGGAGGCTGAACTTGGTTATGAGATTGATTATATTGCTAGATATGTTGAAGAAGGTGGCCTTACTGGAGAGCGCAAACGGTGGGTGCCTCGAGGTGGTAAAACACCTCTAGATCCTGATGCTGATGGGTTTCTATATTCAAACCCAATAGAGACCTCCTTCAAACAAAGATGCCTTGAGGAGAGGAAGGTGTACCATAGGAAGCTTCTGAAGAAGTTGCAGTATGAAGGGATTGTAGCTTTCGGTGATGGTGGTGTATCTGAATCTGATTATGTTAGAGTGCTCGAGTGGCTaaagaaaatgataaagggGCCTAAACAGAATGTTTTAAAGCCTAAGGCTGCTAGTAAAATGCTTGTGAATGAATTGAAGGAAGAACTAGACGCACAAGGTTTGCCTACTGATGGAAACAGAAATGTTCTTTACCAGCGTGTTCAGAAAGCAAGGAGAATAAATCAATCACGTGGTAGGCCGCTTTGGGTTCCTCCCATtgaagaggaggaagaagagGTGGATGAAGAGCTGGATGCATTGATTTCACGCATAAAGCTGGAGGAAGGAAATACAGAGTATTGGAAACGCCGCTTCTTAGGAGAAGGTTTAAATGCAATGGTTGAAGATAAATCAGAGTCCCCTGATGTTCAAGATTATATTGATGTTGGAGAGGATGATGCAAAAGAggctgaagatgatgatgatgatgatgatgatgaggaagTAGAACAGGCAGAAGAGGAAGTTGAAGAACCAGTAGAAAACCGAGATGTGGAGAGgataaaggaaaaggaaaaggaagtTGAAGGGAAAAGGCCCCTTCAAATGATTGGAATCCAGCTGTTGAAAGATTCTGACCTACCCTCTGCCACTTCTAAAAggttaagaagaagaagaagaccaTCTCGGAATAGGGGCGAGGATGATGCCGATGATGATTGGTTTCCTTTGGATATATTTGAGGCATTTAAGGAAATGAGGAATCGAAGAGTGTTTGATGTCTCAGACATGTATACCTTAGCAGACGCTTGGGGTTGGACATGGGAGAGAGAACTGAAGAACAAACCTCCTCATAGATGGTCGCAGGAATGGGAAGTCGGGTTGGCAATCAAAGTTATGCAGAAGGTCATAAAAGTGGGAGGGACACCAACTATTGGAGATTGTGCCGTGATCTTGCGTGCAGCTATAAGAGCACCTCTACCTTCAGctttcttgacaattttgcagaCAACTCATAGTCTTGGTTATAAATTTGGGAGACCGCTATATGAAGAGGTTATCTCTCTCTGCCTTGATCTTGGGGAACTAGATGCAGCTGTTGCCGTTGTGGCAGACGTGGAGACCACGGGGATCACGGTTTCAGATCAGACTCTGGACAGGGTGATTTCTGCTAAACAAGAAATTAACAGTTCTTCAAATGGTGACATGGATGCAGGATTGTAA 2652 0.4106 MHSCYSYGYNYIPFKLNRLTPRTVPVRAAVTSPEKRSRKKKPAKDDDSSLENSLRFSFMEELMHRAKNRDSTGVSQIMYDMIAAGLSPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPIHETFVTLVRLFGSKGHATKGLEILGAMEKLDYDIRHAWLILIEELVRNKHLEDANKVFLKGSKGGLRATDEVYDLLIEEDCKAGDHSNALEISYEMEAAGRMATTFHFNCLLSVQATCGIPEIAFTTFENMEYGEDYMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMLEDHKRVQPNMKTHALLVECFTKYCVVREAIRHFRALKNFEGGTKVLHNEGNYGDPLSLYLRALCRDGRIIDLLEALEALDKDNMQIPPRAMILNRKYRTLVSSWIEPLQEEAELGYEIDYIARYVEEGGLTGERKRWVPRGGKTPLDPDADGFLYSNPIETSFKQRCLEERKVYHRKLLKKLQYEGIVAFGDGGVSESDYVRVLEWLKKMIKGPKQNVLKPKAASKMLVNELKEELDAQGLPTDGNRNVLYQRVQKARRINQSRGRPLWVPPIEEEEEEVDEELDALISRIKLEEGNTEYWKRRFLGEGLNAMVEDKSESPDVQDYIDVGEDDAKEAEDDDDDDDDEEVEQAEEEVEEPVENRDVERIKEKEKEVEGKRPLQMIGIQLLKDSDLPSATSKRLRRRRRPSRNRGEDDADDDWFPLDIFEAFKEMRNRRVFDVSDMYTLADAWGWTWERELKNKPPHRWSQEWEVGLAIKVMQKVIKVGGTPTIGDCAVILRAAIRAPLPSAFLTILQTTHSLGYKFGRPLYEEVISLCLDLGELDAAVAVVADVETTGITVSDQTLDRVISAKQEINSSSNGDMDAGL 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03291 883 MobiDBLite consensus disorder prediction 657 672 - -
Tsu01g03291 883 MobiDBLite consensus disorder prediction 630 672 - -
Tsu01g03291 883 Gene3D Tetratricopeptide repeat domain 32 161 IPR011990 GO:0005515
Tsu01g03291 883 SUPERFAMILY SAP domain 520 557 IPR036361 -
Tsu01g03291 883 PANTHER PLASTID TRANSCRIPTIONALLY ACTIVE 3 23 804 - -
Tsu01g03291 883 MobiDBLite consensus disorder prediction 693 714 - -
Tsu01g03291 883 Gene3D Tetratricopeptide repeat domain 165 440 IPR011990 GO:0005515
Tsu01g03291 883 ProSiteProfiles SAP motif profile. 520 554 IPR003034 -
Tsu01g03291 883 MobiDBLite consensus disorder prediction 32 49 - -
Tsu01g03291 883 PANTHER - 23 804 - -
Tsu01g03291 883 Gene3D SAP domain 505 563 IPR036361 -
Tsu01g03291 883 MobiDBLite consensus disorder prediction 630 656 - -
Tsu01g03291 883 Pfam SAP domain 521 553 IPR003034 -
Tsu01g03291 883 MobiDBLite consensus disorder prediction 27 49 - -
Tsu01g03291 883 SMART sap_9 520 554 IPR003034 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03291 70 333 Glycosyltransferase AT1G05670 22.711 3.29e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03291 - - ccaj:109815736 1367.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03291 01 40791210 40801053 Tsu01g03291 01 40791210 40801053 ECH