Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03252 ATGAGTATCACCCAATTCGCCATGGTTGAAGAGTTGGCTTTTCTTGTGAAGGACAATCTTCCTTGTAAGCATCTAGTTCTTACAATGGAAGAACTTTTAGTTAACTATCTTCAGGCTGAGGAGACAAGtTCAGATGGGATCTTGGAGTTGGAGCCAATGAACTCTTACAACCGTCTTCTCTTACATCGTCTTGCTGAGATATTTGGGTTTGCACATGAATCTGCTGGTGAAGGAGAAGATCGTCATTTGATTCTGGAGAGATGTCCAGATACATCTATACCTCCTATCCTTGTTAGCGATATCCTAGGGACGTATGATGAACCTCAATCTTTGATTGCATCGCACCAAATATTACGGAGAAAAGAAGCCTCTCCCGTCTCACAGACAAATACAGCATCCATTCAGCAAACATTGGAGGAAAGAAAAGCAGCTTATATACTTGCTCGTGAGCGGATTTTTTCTATGAATTTGGGAGAGACAAAAGAACCCGATGAACAAAAGCCACGAAGCGTGCCTGTGGTAGCCCGCCGAATGATTGCGCATGCACTAGGTCAAAGAATTAACACAAAGAATCCGAATGAATTGGTTAGTGATAGTAGGAAGGATAGAGTGCTCACAGATGAATTAAATGTGCCAGATAACAATAGTGAAAAGTCGTATCCAACCAAAGATTATGAAGAGTCTTCACCACTGAGAAGACACAGCAGAACAAGAAACACGGGCAGTTCTACTTCTAATGCAGCCTCACCGAATAAAAGGAATGATCAAACACCAGTTAATAAAGATTCGCCACCATTGTTTCGAGATGGAAAACAAGGGGAAAGTGTGAGCAAAGAGTACATGAAAAAGGAGCACATAGGAGCTGCAAAGAGAATGTTTGCTCATGCTTTGGGAGTACACTCTGGGAAGGATAGTTCTGTTCCTCGAAGTAGAAATGGAGAAAACAACAAGAATTAG 957 0.418 MSITQFAMVEELAFLVKDNLPCKHLVLTMEELLVNYLQAEETSSDGILELEPMNSYNRLLLHRLAEIFGFAHESAGEGEDRHLILERCPDTSIPPILVSDILGTYDEPQSLIASHQILRRKEASPVSQTNTASIQQTLEERKAAYILARERIFSMNLGETKEPDEQKPRSVPVVARRMIAHALGQRINTKNPNELVSDSRKDRVLTDELNVPDNNSEKSYPTKDYEESSPLRRHSRTRNTGSSTSNAASPNKRNDQTPVNKDSPPLFRDGKQGESVSKEYMKKEHIGAAKRMFAHALGVHSGKDSSVPRSRNGENNKN 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03252 318 PANTHER CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN 2 316 - -
Tsu01g03252 318 MobiDBLite consensus disorder prediction 219 234 - -
Tsu01g03252 318 MobiDBLite consensus disorder prediction 272 290 - -
Tsu01g03252 318 ProSiteProfiles SUZ domain profile. 92 157 IPR024771 -
Tsu01g03252 318 Pfam R3H domain 26 86 IPR001374 GO:0003676
Tsu01g03252 318 Gene3D - 3 124 IPR036867 GO:0003676
Tsu01g03252 318 CDD R3H_encore_like 22 88 - -
Tsu01g03252 318 MobiDBLite consensus disorder prediction 235 261 - -
Tsu01g03252 318 Pfam SUZ domain 116 154 IPR024771 -
Tsu01g03252 318 ProSiteProfiles R3H domain profile. 23 89 IPR001374 GO:0003676
Tsu01g03252 318 PANTHER RNA-BINDING SUPPRESSOR OF PAS KINASE PROTEIN 1 2 316 - -
Tsu01g03252 318 SUPERFAMILY R3H domain 15 121 IPR036867 GO:0003676
Tsu01g03252 318 MobiDBLite consensus disorder prediction 184 318 - -
Tsu01g03252 318 SMART R3H_4 10 88 IPR001374 GO:0003676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03252 - - gmx:100801478 470.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03252 01 40294449 40298400 Tsu01g03252 01 40294449 40298400 ECH