Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03170 ATGAAGCTACATCAAATAAACATATTATTAGTATCATTGCTCTTTCTTATTCTTGCCAGTAATTTTCCTTCCAAAGCAAAAGGGTCATTACTACCATTCATAGATTCTCCAAACACTCTCTTATCTGATCTCTGGTCAGATCGTTTCCCCGATCCATTTCGCGTCTTAGAACAAATTCCCTTTGGAGTAGAGAAAACAGAATCATCATCCATATCACTTTCACAAGCTAGGGTAGACTGGAAGGAAACTCCAGAAGGACATGTTATAATGTTGGATGTTCCAGGTTTGAAAAAAGATGATATAAAGATAGAAGTGGAAGAGAATAGGGTACTTAGAGTGAGTGGTGAaaggaagaaagaagaagagaaaaaaggtGATCATTGGCATAGAGTTGAAAGATCATATGGAAAATTCTGGAGACAGTTTAGATTGCCAGAGAATGTTGATTTGGATTCTGTTAAGGCTAAGATTGAAAATGGTGTTCTTACTTTGACACTTGATAAGTTGTCACATGATAAGATTAAAGGTCCTAGAGTTGTTAACATTGCTGGGGAGGATGAAAAACCAGTTAAGCTTAGCAATGATGAGTTGAAATAA 597 0.3467 MKLHQINILLVSLLFLILASNFPSKAKGSLLPFIDSPNTLLSDLWSDRFPDPFRVLEQIPFGVEKTESSSISLSQARVDWKETPEGHVIMLDVPGLKKDDIKIEVEENRVLRVSGERKKEEEKKGDHWHRVERSYGKFWRQFRLPENVDLDSVKAKIENGVLTLTLDKLSHDKIKGPRVVNIAGEDEKPVKLSNDELK 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03170 198 PANTHER 22.0 KDA HEAT SHOCK PROTEIN 13 187 - -
Tsu01g03170 198 SUPERFAMILY HSP20-like chaperones 44 178 IPR008978 -
Tsu01g03170 198 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 69 185 IPR002068 -
Tsu01g03170 198 Pfam Hsp20/alpha crystallin family 79 182 IPR002068 -
Tsu01g03170 198 CDD ACD_ScHsp26_like 77 168 - -
Tsu01g03170 198 ProSiteProfiles CS domain profile. 73 180 IPR007052 -
Tsu01g03170 198 Gene3D - 38 184 IPR008978 -
Tsu01g03170 198 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 13 187 - -
Tsu01g03170 198 Coils Coil 103 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03170 Tsu-Chr1 39115260 39115856 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03170 K13993 - gmx:100500319 291.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03170 01 39115260 39115856 Tsu01g03170 01 39115260 39115856 ECH