Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03168 ATGTCAGGCTCAAAAGATCCATTAGTGATATCATTTGGTGAAATGCTTATAGATTTTGTTCCTGACAAATCTGGTGTATCCTTGGCTGAGTCTTATGCTTTCATCAAAGCACCTGGTGGTGCCCCTGCCAATGTGGCTTGTGCTGTTTCAAAACTTGGTGGCAATGCTGCCTTCATTGGCAAGGTAGGTGATGATGAGTTTGGAAAGATGTTAGCTGACATCTTGAAGAAAAATGGGGTGAATACAGCTGGTGTTAGTTTTGACAAAGAGGCTAGAACTGCATTGGCTTTTGTGACATTGAGACACGACGGAGAGAGGGAGTTCATGTTTTATAGAAATCCAAGTGCAGATATGTTACTGAAAGAATCTGAtttgaaaatggatttgatTAAGCAAGCAAAGATATTTCATTATGGATCTATTAGTCTTATTTCCGAGCCATGCAGATCTGCTCACATGGCTGCCATGAAAGCTGCTAGAGAAGCTGGTGCTTTGTTGTCCTATGATCCAAATGTCAGGCTTCCTTTGTGGCCTTCTGCTGAGGCTGCTAGGTCTGGAATCAAAAGCATTTGGAATGAGGCTGATTTTATTAAGGTGAGTGATGATGAAGTTGAATTTCTTACACAAAAAGATTCTCAGAATGAAGAGGCTGTTAAGTCTCTGTGGCATGACAAGTTGAAGTTGCTTCTTGTTACTGATGGAGAGAAGGGATGCAGATATATCACTAAGAAATTTAAAGGAAAGGTAGGTGGATTTAAAGTGAGCACAGTTGACACAACCGGTGCTGGTGATTCTTTTGTTGGTGCAGTTCTCAAAGCTGTGGCTAGAGACCCTTCGATATTTGATGATGAAGCAAAATTGAAAGAGGCTTTGTCATTTGCAAATGCTTGTGGAGCAATGTGTACAACACAAAAGGGAGCCATTCCTGCACTTCCAACTACTGAAGAGGCTCAGAAATTCATGTCCAGCAATAAAGCCAATTAA 984 0.4065 MSGSKDPLVISFGEMLIDFVPDKSGVSLAESYAFIKAPGGAPANVACAVSKLGGNAAFIGKVGDDEFGKMLADILKKNGVNTAGVSFDKEARTALAFVTLRHDGEREFMFYRNPSADMLLKESDLKMDLIKQAKIFHYGSISLISEPCRSAHMAAMKAAREAGALLSYDPNVRLPLWPSAEAARSGIKSIWNEADFIKVSDDEVEFLTQKDSQNEEAVKSLWHDKLKLLLVTDGEKGCRYITKKFKGKVGGFKVSTVDTTGAGDSFVGAVLKAVARDPSIFDDEAKLKEALSFANACGAMCTTQKGAIPALPTTEEAQKFMSSNKAN 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03168 327 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 258 271 IPR002173 GO:0016773
Tsu01g03168 327 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 39 63 IPR002173 GO:0016773
Tsu01g03168 327 PANTHER FRUCTOKINASE-5-RELATED 4 324 - -
Tsu01g03168 327 PANTHER HEXOKINASE FAMILY MEMBER 4 324 - -
Tsu01g03168 327 Pfam pfkB family carbohydrate kinase 8 313 IPR011611 -
Tsu01g03168 327 SUPERFAMILY Ribokinase-like 9 321 IPR029056 -
Tsu01g03168 327 CDD bac_FRK 8 308 - -
Tsu01g03168 327 Gene3D - 5 327 IPR029056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03168 Tsu-Chr1 39109711 39112372 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03168 K00847 - gmx:100775586 530.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03168 01 39109711 39112372 Tsu01g03168 01 39109711 39112372 ECH