Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03167 ATGGCATCATCATGTGTAGGAACTTTATCATCACTCAACTCCTCTCTACTTTTCTCACAAACCAAACATTTATCAGCTACTCCCCGGGTAAGTGTAACTTTGCCTTCAACAAGGAGAAGAGTTGTAAGAGCTGTTGTCACAGAGAAACTTGGCATCAAGATTGAGAGGAACCCTCCTGAGTCTAAGCTCACTCAACTTGGTGTTAGGCAGTGGCCCAAATGGGGATGCCCTCCAAGCAATTTTCCATGGACATATGAAGCCAAAGAGACATGCTATCTTTTGGAAGGAAAAGTGAAGGTGACTCCTAGTGGGGCTAATGAAGCAGTTGAAATTGCTGCTGGTGATTTGGTTGTGTTTCCTAAAGGGATGAGTTGCACTTGGGATGTTTCTGTTGGTGTGGATAAGcattataaatttgaataa 423 0.4232 MASSCVGTLSSLNSSLLFSQTKHLSATPRVSVTLPSTRRRVVRAVVTEKLGIKIERNPPESKLTQLGVRQWPKWGCPPSNFPWTYEAKETCYLLEGKVKVTPSGANEAVEIAAGDLVVFPKGMSCTWDVSVGVDKHYKFE 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03167 140 PANTHER OS04G0445200 PROTEIN 36 140 - -
Tsu01g03167 140 SUPERFAMILY RmlC-like cupins 59 137 IPR011051 -
Tsu01g03167 140 CDD cupin_TM1112-like 71 139 - -
Tsu01g03167 140 Gene3D Jelly Rolls 41 139 IPR014710 -
Tsu01g03167 140 Pfam EutQ-like cupin domain 64 137 IPR008579 -
Tsu01g03167 140 PANTHER OS04G0445200 PROTEIN 36 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03167 Tsu-Chr1 39106225 39107708 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03167 K06995 - gmx:100527470 202.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03167 01 39106225 39107708 Tsu01g03167 01 39106225 39107708 ECH