Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02892 ATGGTTAGCGGCAACATTTTTCATTGTAGAAAGAATTCGTGGCCTACTGAAGAGTATATCAATAAAACTACTTTACAGTTGTTTGATTTTGATAGTGCTGCTCCTCCTGAACAAGCTTGGAGAAGGAGATTAAATAGCCATGCCAATCTTCTTAAAGAATTTAGAGTAACTTTTATGGAAGCTATAAAAATGGTTCGATTAGGTATACGTATGTGGTCATATGTTAGGGAAGAGGCTTCTCATGGAAGGAAAGCACCTATAGATCCTTTCACTCGAGAAAGTTGCAAGCCATCTGCATCTCAAGGTGTTCCACTTGGAGGGATGGGGAGTGGAAGCATATCAAGAGGATTTAGAGGCGAGTTCAGACAATGGCAAATCATTCCTGGTCTATGTGAACCATCGCCTGTCATGGCCAACCAGTTCTCTATTTTTGTAAGTAGAGAGGGAGGAAACAAAAGTTTTGCATCCGTTTTGGCTCCTGGTCAGCATGAAGGTTTAGGATCTAGCAGGAAAGCTGATGAACAGGGTATATCATCATGGGGATGGAATCTAAATGGCCAGCACTCAACTTACCATGCTTTGTTTCCAAGAGCTTGGACTGTTTATGAtgGCGAGCCAGACCCAGAACTAAAAATATCATGCCGACAGATATCTCCTTTCATACCACATAATTACAGAGAAAGCAGTCTACCTGCCGCTGTTTTTGTCTATACGTTGGTAAACACCGGTAAGGAAAGAGCTAAAGTCAGCCTTCTATTAACTTGGGCGAATTCCATTGGTGGAAACTCTCACTTGTCAGGAGATCATGTGAATGAACCTTTCATAGCTGAAGATGGTGTCTCCGGCGTACTTCTATATCACAAGACAGCGAAAGACAACCCTCCTGTTACCTTTTCTATTGCTGCATGTGAAACACAGAATGTTAGTGTTTCCGTTTTGCCATGTTTTGGGCTGTCCGAAGGAAGTAGTGTAACAGCAAAAGGAATGTGGTCTAAAATGGTGAAGGATGGGCAATTTGACCGGGGAAATTTCTCTTCTGGACCCAGCGTGCCCTCATCACCTGGAGAGACACTATGTGCTGCTGTTTCAGCTTCTGCATGGGTGGAACCCCATGGAAAATGTACTGTTGCATTTAGCCTTGCATGGTCATCTCCTAAAGTGAAGTTTGTGAAAGGCAGCTCTTTCCACAGGAGATATACAAAATTTTATGGGACTTCTGATAGAGCTGCAGTGGACTTGGCTCATGATGCATTGACACATTATAAAAGGTGGGAAGAAGAGATTGAGAAATGGCAGAATCCTATTCTTAAGGATGAGAAGCTACCAGAATGGTACAAGTTTACATTATTTAATGAACTCTACTTTCTTGTTGCTGGAGGAACAATTTGGATTGACTCTGCTTTGCTATCTACAAATATGAGGAATAGCCAGGATCAGGTTAAAGAGCCAGAAAATGCAGTAGTCCGAATAACTGAAGCTAAAGTGGACTGCAGAAAAAGGGAAGTTGTCGAGTGTACAACAGATAGTACCTATGATTCTACGGCTTCTAGGGGACATAATCACTTGGTTGAAAAACATTCTAGAGATATATCACATGCAAATGGATCTGTGAATGGTCATAGCAAAGGAAACTCTACTAACACTCTGCACTCTTCATCAATAAAGAACCTACAacatgatgatgataatgatgatggtgGAAGGTTCTTGTATTTGGAAGGTGTGGAATATGTCATGTGGTGCACATATGATGTGCACTTCTATGCTTCATTTGCGCTTCTTATGCTCTTTCCCCGTATTGAATTAAATATACAACGGGATTTTGCTCAAGCTGTCCTGTGCGAAGATGGAAGAAGAGTAAAGTTTCTGGCAGAGGGAAACTGGGGAACTCGTAAGGTTTTTGGGGCTGTCCCACATGATTTGGGGACACATGATCCATGGCATGAAATGAATGCCTATAACATTCATGATACTAGTAAGTGGAAAGACCTGAACCCAAAATTTGTACTTCAGGTGTATCGAGATTTTTCTGCAACAGGTGATTTACAATTTGGGGTTGATGTGTGGCCTGCTGTCCGTGCTGCAATGGAATACATGGAGCAATTTGATAGAGATGCTGATGGTCTTATTGAGAATGACGGTTTCCCTGATCAGACATATGATACATGGACAGTCCATGGTGTGAGTGCTTATTGTGGTGGTCTTTGGCTTGCTGCTCTTCAAGCTGCAGCTGCAATGGCCATTCAACTAGGTGACAGAGATTTTGCAGAAACATGCAAAAGGAAGTTTCTGAAGGCTAAACCAGTATTTGAACAAAAGCTGTGGAATGGTTCTTATTTTAACTATGACAGTGGCTCAAGTGGTAACAGTAAATCTATTCAAGCCGATCAATTGGCTGGGCAATGGTATACAGCATCGTCAGGGTTGCCCTCTCTTTTCGATGATTTCAAGATCAAAAGTTCTCTCCGGAAGGTTTATGATTTCAATGTGATGAAAGTTAAAGGTGGCAGGATGGGTGCTGTAAATGGCATGCATCCCAATGGTAAGGTGGATGAAACCTGTATGCAGTCTCGAGAGATATGGACAGGTGTGACCTACGGTGTTGCTGCAACAATGATACTCGCAGGAATGGAGGAGGAGGCCTTCAAAACTGCTGAGGGTATATTTCTTGCAGGCTGGTCAGAAGATGGATATGGATACTGGTTTCAGACTCCAGAGGCATTGACAATTGATGGGCACTATAGATCCCTCATATATATGAGGCCATTGTCAATTTGGGGCATGCAATATGCATTAACTCTTCCAAAGGCAGTACTTGAGGCCCCTAAAATCAACTTCATGGACAGAATCCACCTATCTCCTGTCAATGGACATAACGAAACAGGTGTGAGAAAGATTGCAACGAAAACAAAATGCTTTAGCAATTCTGTGTTTAATTGTGCTTGCTGA 2949 0.4188 MVSGNIFHCRKNSWPTEEYINKTTLQLFDFDSAAPPEQAWRRRLNSHANLLKEFRVTFMEAIKMVRLGIRMWSYVREEASHGRKAPIDPFTRESCKPSASQGVPLGGMGSGSISRGFRGEFRQWQIIPGLCEPSPVMANQFSIFVSREGGNKSFASVLAPGQHEGLGSSRKADEQGISSWGWNLNGQHSTYHALFPRAWTVYDGEPDPELKISCRQISPFIPHNYRESSLPAAVFVYTLVNTGKERAKVSLLLTWANSIGGNSHLSGDHVNEPFIAEDGVSGVLLYHKTAKDNPPVTFSIAACETQNVSVSVLPCFGLSEGSSVTAKGMWSKMVKDGQFDRGNFSSGPSVPSSPGETLCAAVSASAWVEPHGKCTVAFSLAWSSPKVKFVKGSSFHRRYTKFYGTSDRAAVDLAHDALTHYKRWEEEIEKWQNPILKDEKLPEWYKFTLFNELYFLVAGGTIWIDSALLSTNMRNSQDQVKEPENAVVRITEAKVDCRKREVVECTTDSTYDSTASRGHNHLVEKHSRDISHANGSVNGHSKGNSTNTLHSSSIKNLQHDDDNDDGGRFLYLEGVEYVMWCTYDVHFYASFALLMLFPRIELNIQRDFAQAVLCEDGRRVKFLAEGNWGTRKVFGAVPHDLGTHDPWHEMNAYNIHDTSKWKDLNPKFVLQVYRDFSATGDLQFGVDVWPAVRAAMEYMEQFDRDADGLIENDGFPDQTYDTWTVHGVSAYCGGLWLAALQAAAAMAIQLGDRDFAETCKRKFLKAKPVFEQKLWNGSYFNYDSGSSGNSKSIQADQLAGQWYTASSGLPSLFDDFKIKSSLRKVYDFNVMKVKGGRMGAVNGMHPNGKVDETCMQSREIWTGVTYGVAATMILAGMEEEAFKTAEGIFLAGWSEDGYGYWFQTPEALTIDGHYRSLIYMRPLSIWGMQYALTLPKAVLEAPKINFMDRIHLSPVNGHNETGVRKIATKTKCFSNSVFNCAC 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02892 982 SUPERFAMILY Six-hairpin glycosidases 579 928 IPR008928 GO:0005975
Tsu01g02892 982 MobiDBLite consensus disorder prediction 532 554 - -
Tsu01g02892 982 MobiDBLite consensus disorder prediction 85 105 - -
Tsu01g02892 982 Pfam Glycosyl-hydrolase family 116, catalytic region 567 928 IPR006775 GO:0004553
Tsu01g02892 982 PANTHER NON-LYSOSOMAL GLUCOSYLCERAMIDASE 544 982 - -
Tsu01g02892 982 PANTHER NON-LYSOSOMAL GLUCOSYLCERAMIDASE 1 486 - -
Tsu01g02892 982 Gene3D - 615 917 IPR012341 GO:0005975
Tsu01g02892 982 MobiDBLite consensus disorder prediction 531 559 - -
Tsu01g02892 982 PANTHER BILE ACID BETA-GLUCOSIDASE-RELATED 1 486 - -
Tsu01g02892 982 PIRSF Beta_gluc_GBA2 33 938 IPR014551 GO:0004348|GO:0006680|GO:0016020
Tsu01g02892 982 Pfam beta-glucosidase 2, glycosyl-hydrolase family 116 N-term 102 424 IPR024462 -
Tsu01g02892 982 PANTHER BILE ACID BETA-GLUCOSIDASE-RELATED 544 982 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02892 Tsu-Chr1 35049698 35061526 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02892 K17108 - gmx:100777599 1729.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03853 07 44696345 44699983 Tsu01g02892 01 35049698 35061526 PCT