Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02830 atgctGCTTAGGAATAGATCAAGAGTAGTGACCAAACAAAGTTTGATGGGTGAACAATCACCAAATCAAAACTTGATCACTACAACTATTCCATCTCTATTTGGTTCACCAAACTATAGAGATTTTCATTTCACTTCCAAGAAATCTCTCTATGGTACTGAAGCTTTGATAAGTCCAACATCAATTCTTGACACTAAAGCTTTAACTCAATTTGAGAATCCTTTCTCAATTAACAATAGGAACAAAGTTTGTAGTACCTCAAGAGACAAAGTAGATTCAAGAATCATTGGACTTGGTCTTGTTGGTGTTCTAAAAGATGAAACTTTTCAtcaaaattctgaaaaattaaGCAATAGAAAAGTTCTGTTTGGAACTGAACTTAGAGTGAAAATCCCTTCCTTGCCCACTTCCACGTTTGAGtcaaaaactgatttttttggTGGCAAAATCAATGATTCACAAAAGGGTGTTCTTAGTTTGAGTGAAATGGAGCTTTCTGAAGAATACACATGTGTGAAATCACATGGACCAAATCCAAAAACAACTCATATATTTGATAATTGTGTTGTGGAAAATTACTGTTTTGTCCCTAATAGTCCTCATTATTTTTCACTGAATTTTCTTAGCTTTTGTCACACTTGCAAAAATCATCTTGAGCATACAAAAGACATCTTCATTTACAGaggTGAAAAAGCTTTTTGCAGTCAAGAATGTCGACACAAAGAGATGGTGTTAGATGGAGCagaaaattaa 753 0.3214 MLLRNRSRVVTKQSLMGEQSPNQNLITTTIPSLFGSPNYRDFHFTSKKSLYGTEALISPTSILDTKALTQFENPFSINNRNKVCSTSRDKVDSRIIGLGLVGVLKDETFHQNSEKLSNRKVLFGTELRVKIPSLPTSTFESKTDFFGGKINDSQKGVLSLSEMELSEEYTCVKSHGPNPKTTHIFDNCVVENYCFVPNSPHYFSLNFLSFCHTCKNHLEHTKDIFIYRGEKAFCSQECRHKEMVLDGAEN 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02830 250 ProSiteProfiles Zinc finger FLZ-type profile. 206 250 IPR007650 -
Tsu01g02830 250 PANTHER FCS-LIKE ZINC FINGER 8 2 250 IPR044593 -
Tsu01g02830 250 Pfam zinc-finger of the FCS-type, C2-C2 204 247 IPR007650 -
Tsu01g02830 250 PANTHER ZF-FLZ DOMAIN-CONTAINING PROTEIN-RELATED 2 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02830 Tsu-Chr1 33845991 33847419 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02830 - - mtr:MTR_1g071780 390.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g02830 01 33845991 33847419 Tsu01g02830 01 33845991 33847419 ECH
Tsu07g03597 07 42152494 42154737 Tsu01g02830 01 33845991 33847419 PCT