Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02821 ATGAGAGATGAAAACTTGAAGAAAAGCAAGcTTTCATGGCCAAAAACTTTGGTTAAGAAATGGTTCAATATTAAGAGTAAAGCTGAAGATTTTCAAGCAGATGATGATGTTCTTTATggagGTGTTGATGAAGAGTGGAGGAAAAACTGTTCAAAGAGGGAAGAATGCACTAACAAGAAAAGCAAAACAGAAAGAACAAAGAGAAGACACTCAGAAAGAACGCGGCGATGTAAGATTGATCATGATGCAGCTCAGGTTACAGATGTGAATAATTATagAATCTTTGCTGCGACTTGGAATGTAGCCGGAAGATCTCCTCCAAGTTATTTGAATCTCGAAGATTGGCTTCATACTTCTCCTCCTGCCGATATTTATGTTCTTGGGTTTCAAGAGATTGTACCTCTCAATGCTGGAAATGTTTTGGGGACAGAAGACAACGGTCCTGCTAGAAAATGGCTAGCTCTTATTCGAAAGACGCTGAATAGTCTTCCTGGAACAAGTGGTGAATGCCACACGAACTCACCTCTTCCAGATCCCGTTGTAGAGTTAGATTCTGATTTTGAGGGATCGATGAGGCAGAAGGCTACTTCTTTCTTCCATCGAAGGTCGTTCCAATCTTTGAGTCATAGTATGAGAATGGACAATGACTTGTTAGTGCCACAAGCATGCCTCGATCGCCGTTTCAGTGTCTGTGATAGAATGATATTTGGTCATAGAGCAGGTGACTATGACCCTAATTATAGATGGGGGTCCTCGGATGACGAAAACGGTGAATCTCCTGTTATAGCGCAGTATTCACCAATGTCGTATAGAGGGTTTGGCTCTATGGAGGACAGAGATAGACAAACGGAGAGCTCGAGATATTGTTTGGTTGCTAGTAAGCAAATGGTTGGGATTTTTCTAACTGTTTGGGTGAAAAGCAATATAAGAGACGATGTTCGCAACATGAAAGTGTCTTGCGTTGGCAGAGGGTTGATGGGATATCTTGGAAACAAGGGTTCGATATCAATTAGCATGTCTTTGCACAAAACAAGTTTTTGCTTCATATGTAGTCATTTGACTTCTGGACAAAAGGAGGGTGATGAGCTAAGGAGAAATTCAGATGTAATGGAGATTCTTAGAAAGACAAGGTTTCCCCGAGTTAATGGCATTAGTGATGAGAGTTCGCCTCAGACTATCCTGGATCATGATCGAATAATTTGGCTGGGAGATCTAAACTATCGGATAGCCCTTACTTACCGTGCAGCAAAAGCTCTTGTTGAGATGCATAATTGGAAGGTATTGTTAGAGAATGACCAGcTGCATATAGAGCGAGAACAAGGTCGTGTCTTTGAAGGATGGAATGAGGGGCAAATATACTTCCCTCCCACGTACAAGTATTCAAACAATTCGGACAGATATGCAGGCGATGAAAGACAGTCAAAACAAAAGAGAAGAACTCCGGCGTGGTGTGATCGAATTTTATGGTATGGAAGAGGTCTCCGCCAATTATCTTATGTTCGTGGGGAGTCAAGATTTTCTGATCATAGACCAGTTTGTAGTGTGTTCTTAGCAGAAGTTGAGTCTGTTAGCCGTAACCGAATAAGAAAATGCTCAAGTTGCTCCAGTTCAAGGGTCGAAGTAGAAGAGTTGTTGCCTCATTCACATGGTTACAATTATACCGATATGACATACTATTGA 1680 0.4119 MRDENLKKSKLSWPKTLVKKWFNIKSKAEDFQADDDVLYGGVDEEWRKNCSKREECTNKKSKTERTKRRHSERTRRCKIDHDAAQVTDVNNYRIFAATWNVAGRSPPSYLNLEDWLHTSPPADIYVLGFQEIVPLNAGNVLGTEDNGPARKWLALIRKTLNSLPGTSGECHTNSPLPDPVVELDSDFEGSMRQKATSFFHRRSFQSLSHSMRMDNDLLVPQACLDRRFSVCDRMIFGHRAGDYDPNYRWGSSDDENGESPVIAQYSPMSYRGFGSMEDRDRQTESSRYCLVASKQMVGIFLTVWVKSNIRDDVRNMKVSCVGRGLMGYLGNKGSISISMSLHKTSFCFICSHLTSGQKEGDELRRNSDVMEILRKTRFPRVNGISDESSPQTILDHDRIIWLGDLNYRIALTYRAAKALVEMHNWKVLLENDQLHIEREQGRVFEGWNEGQIYFPPTYKYSNNSDRYAGDERQSKQKRRTPAWCDRILWYGRGLRQLSYVRGESRFSDHRPVCSVFLAEVESVSRNRIRKCSSCSSSRVEVEELLPHSHGYNYTDMTYY 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02821 559 PANTHER PHOSPHORIC MONOESTER HYDROLASE-RELATED 3 557 - -
Tsu01g02821 559 Pfam Endonuclease/Exonuclease/phosphatase family 97 509 IPR005135 GO:0003824
Tsu01g02821 559 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 3 557 IPR045849 GO:0004445|GO:0046855
Tsu01g02821 559 SMART i5p_5 213 524 IPR000300 GO:0016791|GO:0046856
Tsu01g02821 559 Gene3D Endonuclease/exonuclease/phosphatase 71 213 IPR036691 -
Tsu01g02821 559 Gene3D Endonuclease/exonuclease/phosphatase 258 544 IPR036691 -
Tsu01g02821 559 SUPERFAMILY DNase I-like 82 533 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02821 Tsu-Chr1 33770057 33774251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02821 284 523 Acyl Lipid Metabolism Gene Families AT1G65580 30.605 7.02e-30 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02821 - - gmx:100788764 996.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g02821 01 33770057 33774251 Tsu01g02821 01 33770057 33774251 ECH
Tsu07g03603 07 42188773 42192208 Tsu01g02821 01 33770057 33774251 PCT