Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02764 ATGGATGCAAAAGTGATTACACACAACATGAGCCTAACACCAACTTTAGCTCAGTGGAGAAGCCTAAGACTTAAACCAAAACACACTTTTGTAGTTGGAGTTCTTGCAAGGCCTTCAGATAACATTGCTGAAGAAACATTAAGAAAAACTAATGTATACAAAGATAATTGGTTTGATAAATTAGCTATAAACCATTTATCAAAAAGTGTTCAAGCAGCAACAGGCATAAGTAACAATAAGAATGGTTTTGATAGCCTTGTGGAAGCAACTACTGTGGCTTCACAGAAATTTAATACCATTCAACAGCAAGAAGTTATTCTAGATGCACTTGATAGAGCTTTTCCAAAGCCAATACTTGCAATGATAAGGAGAGTGATGCCACCTTCTAAATTAGCAAGGGAATATTTTGCCGTCTTCACCACTTTGTTCTTTGCTTGGTTACTCGGTCCCTCTGAGGTGAGAGAATCAGAAGTCAATGGGAAAAGGGAAAAGAATGTTGTCCACATAAAAAAGTGCAGAGTCTTAGAACAAACAAATTGTGTTGGGGTATGTATTAATCTCTGCAAAATGCCAACTCAAATATTCATAAAGGACTCTTTTGGTATGCCACTCAACATGGTCCCAA 625 0.3712 MDAKVITHNMSLTPTLAQWRSLRLKPKHTFVVGVLARPSDNIAEETLRKTNVYKDNWFDKLAINHLSKSVQAATGISNNKNGFDSLVEATTVASQKFNTIQQQEVILDALDRAFPKPILAMIRRVMPPSKLAREYFAVFTTLFFAWLLGPSEVRESEVNGKREKNVVHIKKCRVLEQTNCVGVCINLCKMPTQIFIKDSFGMPLNMVP 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02764 208 Pfam Beta-carotene isomerase D27-like, C-terminal 146 208 IPR025114 GO:0005506
Tsu01g02764 208 PANTHER BETA-CAROTENE ISOMERASE D27 4 208 IPR038938 -
Tsu01g02764 208 PANTHER BETA-CAROTENE ISOMERASE D27, CHLOROPLASTIC 4 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02764 Tsu-Chr1 32303388 32308676 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02764 K17911 - qsu:112034272 276.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g02764 01 32303388 32308676 Tsu01g02764 01 32303388 32308676 ECH
Tsu07g03632 07 42536348 42542202 Tsu01g02764 01 32303388 32308676 PCT