Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02667 ATGCATTATCGCCTGAAAAGTTGGAGAGCCGGAAAGATCATCCCACGTTTAAGATTATCAAAGGCTGGCCAAACTCCAAAGCTTGAGAGATTCTCTCATTACGTAGCTAGGCAAATGGGGTTCAAAGATAGGAAGAATTGTCCTAATTTATGTAAATTGGCTTCTGAATACATAAGAAAATCCGAGGGATGTGAAGATGATATCTATGCTTTCTTTGAAAATGAACAAAATGCAGATTCACTTTTTGTCAAGCTTGTGGAGGAGTTTGAGAGATGCATTCTTAGTTACTTTGCATTCCATTGGAGCCTTGGTGATTTATTGATAAGTCAGGTCTTGAGCTCTGACACTGaaccaaaaaagaaattcaagCACATAGTTATGGCAGCAACTAGGGATCAAAGGGTTGAAAGGGTAACAAAGAATTTAAAGGTGGCTAGAGTTTTCAATACATTAGTAGAAGAGATGAAAGCAATGGGACTTGTATCAAATGATGACAATCGATGCACAGAGGTTATGGCACCGGTGGCTCACAGTGATAGAAGTCCTGTGCTCCTTTTCATGGGTGGTGGTATGGGAGCTGGCAAGAGCACTGTGCTTAAAGACATTCTCAAAGAGCCTTTCTGGGTAGGAGCGGCTAGCAATGCTGTTGTCATTGAGGCAGATGCATTCAAAGAATCGGATGTCATCTATAGGGCCCTTAGCTCAAGAGGCCAACATCATGACATGATTAAGATGGCCGAATTGGTACACCAATCGTCAACAGATGCGGCCTCATCGCTCCTAGTAACGGCACTAAATGAAGGACGAGACGTAATTATGGATGGAACATTCTCTTGGGTACCATTTGTTGTGCAAACAATAACAATGGCTAGAAATGTCCACCGCCGCCGTTACCGAATGGGAGCTGGCTACAAGGTGAATGATGATGGAACTATAACAGAGAATTACTGGGAACgaattgaaaatgaagaacCTGAACAAGTTGGTGGAAAAAAGAGGAAACCATATAGGTTAGAGCTTGTCGGAGTAGTATGTGATGCTTACCTTGCAGTCATTAGAGGCATAAGGAGAGCTATCATGTGCAGAAGAGCAGTAAGAGTGAAATCACAATTGAAATCACACAGGAGATTTGCAGATGCATTTATGACTTATTGTCAGCTAGTAGATAATGCAAGGCTATACAGCACAAATGCTTTAGAAGGCCCACCCAAATTGATAGGATGGAAAGAAAGAGACAAGACATTGCTAGTTGATCCAGATGAAATTGATTGTTTGAGGAGAGTTGCTAGGTTAAATGAAGATGCTGACTCCATATATGAACTTTACAAGCACCCTAACCCAACTTGTGAAGCAGGATCTATATGGAAAGACATTGTATTATCTCCTTCAAGGTTGAACATTCAACAAGAGCTCAAGAATTCAATTCAAAAGGTTGAGAGATTTGCAATGCAAAATGCTAACTTGTTGATGGAGCAGTGA 1479 0.4037 MHYRLKSWRAGKIIPRLRLSKAGQTPKLERFSHYVARQMGFKDRKNCPNLCKLASEYIRKSEGCEDDIYAFFENEQNADSLFVKLVEEFERCILSYFAFHWSLGDLLISQVLSSDTEPKKKFKHIVMAATRDQRVERVTKNLKVARVFNTLVEEMKAMGLVSNDDNRCTEVMAPVAHSDRSPVLLFMGGGMGAGKSTVLKDILKEPFWVGAASNAVVIEADAFKESDVIYRALSSRGQHHDMIKMAELVHQSSTDAASSLLVTALNEGRDVIMDGTFSWVPFVVQTITMARNVHRRRYRMGAGYKVNDDGTITENYWERIENEEPEQVGGKKRKPYRLELVGVVCDAYLAVIRGIRRAIMCRRAVRVKSQLKSHRRFADAFMTYCQLVDNARLYSTNALEGPPKLIGWKERDKTLLVDPDEIDCLRRVARLNEDADSIYELYKHPNPTCEAGSIWKDIVLSPSRLNIQQELKNSIQKVERFAMQNANLLMEQ 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02667 492 Pfam Zeta toxin 176 289 IPR010488 GO:0005524|GO:0016301
Tsu01g02667 492 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 1 486 - -
Tsu01g02667 492 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 316 IPR027417 -
Tsu01g02667 492 Gene3D - 164 416 IPR027417 -
Tsu01g02667 492 PANTHER UNCHARACTERIZED 1 486 IPR044802 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02667 Tsu-Chr1 30191203 30195137 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02667 - - mtr:MTR_1g070385 930.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03653 07 42750350 42754250 Tsu01g02667 01 30191203 30195137 PCT