Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02660 ATGTTTTGGTTGCAGACATATAGTACGGATAGTTTGAAGTTAAAAGAAGTTAAAGAACAGATTCAAGAAGGTTCTGAAGAATTAGAAGAGCCAAATCAAGTTGTTTCTCAGAAAAAAGATGTTGTTTCAACAATTAGTTACAGTTCAAAAAAGAATAATGATGGCGATGAACCTAGAATTCCAGTGTTTGAAAGAAATGTTTCAGGATTCAACTATGATGAAAGACAAGACGAGGATGCTCGGAAAAAAGATTCATTCTCCACGGATGAAGATACAAATGTACATGCTGTTCCACATAGTACGTCGAAGGAGAATATTAGTGTGACAAATAGGCCATCAGATCGAATAGAAGACCATCATCATATTTTAAACTCACACTCTCGTGAAGTGAAAAATCAAAAGCTTCGAGAGATTAAGGATCAAATTTTAATGGCTAAAGTATACTTGAAGTTTGCCCCACCAAGCAGCAACTCCCGCTTGAAGGAGCTGGAGCTGCGAATGAAAGAGATGGAGCGAGCAGTAGAAGGAGCCACCCGGGATTTAGATTTGTCTAGGAGTGTTTTGCAGGCAATGAGACACATGGAGGCCTCACTGTCTACTGTCGGCCGCGCATTCTCAGACTGTTCTTTGGTTTCTAAGCTTCAAGCAGTGAAGCGCAAAACTGAAGAGCAAGTTCGTTTTCAGAGAAGTCAAGCAACATATCTTGTTCATCTTGCTGTAAGGACTGCCCAAAAAAGCTTTCATTGTCTTTCTATGCGGCTGACTGCTGAATATTTTTCCCTGAGACCTGAGGAGAGAAAGCTTCCAAATGAGAATAAGATTCATCATACGGATCTTTATCATTATGCTATCTTCTCTGACAATGTTTTGGCTTGTGCTGTCGTTGTTAACTCTACTGTCACTACAGCCAAGGAACCAGAGAAACTTGTTTTCCATATAGTGACTGATTCACTCAACTTGCCAGCGATCTCAATGTGGTTCTTGATAAACTCTCCTGGCAATGCCACAGTCCATATACAGAGCATAGACAACTTTGAATGGTTGTCGAAATACAATACCTTCTTTAAAAGTGGTAACGGCGATCCAAGATACACTTCTGAATTGATCTACTTGCTTTTCTACCTGCCAGAAATTTTCCCTGCCCTAAATAAGATTGTGGTCTTTGATCATGATGTGGTGGTTCAACAAGATCTCGGCGGACTATGGAATGCCAATTTGAAGGGAAATGTTATTGGAGCAGTTGGAACTTGTCAGGAAGGCAAAACCCCATTTCATAGGATTGATGCGTTCATAAACTTCTCAGATCCACTAATTGGCCAGAGTTTTGATGCCAATTCTTGCACATGGGCATTTGGGGTGAATTTGTTTGATTTACAACAATGGAGGACACATACTTTAACGGCTGTTTATCACAAATATTCGCAAATGGGTTCTAAGAAGCCATTATGGAATTGGAACGTTGCACGTATGCCTTTAGGTTGGCTCACCTTCTATAACAAGACAGAGTTGTTGGACAGACGATGGCACATTCTTGGCCTCGGTCATAACTCGGGAGTCGATCGAAATGAGATTGATCAGGCTGCCGTTGTACACTATGATGGGATTAGGAAACCATGGTTAGATATTGCAATGGGCAGATATAGAAGTTATTGGActaaatttttggattttgacCACCCTTTTCTGCAACAGTGCAATCTCCAGGCATAG 1710 0.4035 MFWLQTYSTDSLKLKEVKEQIQEGSEELEEPNQVVSQKKDVVSTISYSSKKNNDGDEPRIPVFERNVSGFNYDERQDEDARKKDSFSTDEDTNVHAVPHSTSKENISVTNRPSDRIEDHHHILNSHSREVKNQKLREIKDQILMAKVYLKFAPPSSNSRLKELELRMKEMERAVEGATRDLDLSRSVLQAMRHMEASLSTVGRAFSDCSLVSKLQAVKRKTEEQVRFQRSQATYLVHLAVRTAQKSFHCLSMRLTAEYFSLRPEERKLPNENKIHHTDLYHYAIFSDNVLACAVVVNSTVTTAKEPEKLVFHIVTDSLNLPAISMWFLINSPGNATVHIQSIDNFEWLSKYNTFFKSGNGDPRYTSELIYLLFYLPEIFPALNKIVVFDHDVVVQQDLGGLWNANLKGNVIGAVGTCQEGKTPFHRIDAFINFSDPLIGQSFDANSCTWAFGVNLFDLQQWRTHTLTAVYHKYSQMGSKKPLWNWNVARMPLGWLTFYNKTELLDRRWHILGLGHNSGVDRNEIDQAAVVHYDGIRKPWLDIAMGRYRSYWTKFLDFDHPFLQQCNLQA 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02660 569 Pfam Glycosyl transferase family 8 249 543 IPR002495 GO:0016757
Tsu01g02660 569 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 5 568 IPR029993 GO:0047262
Tsu01g02660 569 Coils Coil 160 180 - -
Tsu01g02660 569 MobiDBLite consensus disorder prediction 91 109 - -
Tsu01g02660 569 MobiDBLite consensus disorder prediction 69 111 - -
Tsu01g02660 569 SUPERFAMILY Nucleotide-diphospho-sugar transferases 280 566 IPR029044 -
Tsu01g02660 569 PANTHER HEXOSYLTRANSFERASE 5 568 - -
Tsu01g02660 569 MobiDBLite consensus disorder prediction 70 90 - -
Tsu01g02660 569 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 282 559 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02660 Tsu-Chr1 29991306 29997833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02660 7 569 Glycosyltransferase AT1G06780 44.718 3.20e-173 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02660 K13648 - gmx:100819255 731.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03646 07 42673461 42679490 Tsu01g02660 01 29991306 29997833 PCT