Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02598 ATGGCTTCAGATTCCAATTCAAACCTTAGAATCAACATAGAAAGCAATCCTTCCGAATCGCGCCTAGCTGAATTGAACATCAAGTGCTGGCCCAAATGGGGGTGTTCACCAGGTAAATACCAATTAAAATTTGATGCAGAGGAGACATGCTATTTGTTAAAAGGAAAGGTGAAAGTATACACAAAAGAGTCATCAGAATTTGTAGAGTTTGGTGCTGGAGATCTTGTGACAATTCCAAAAGGGCTAAGTTCCAACGAACATGTTGGAGACACATTCGTTGATAGTCCCATTCAAGAAGTTGAGCATATAATCCCTGAGGAGGCAGGCAATAATGGAGCTGATGACGACTATTCTCCTCAGCGTGTGGCTGGAGAAACTAATCGTGTGGCTGGAAAAATTAATGTTGAGGAACTCGATAAAACAATACCCGAGGAGCAAGACCTTCCCACCGTTGTCGAAATCCTAGATGATCAAACTTCTGAAGAAAACTTtggagaagaggaagaggaaatGCCAACACAAGGTGGCGAGAGAGAAGTTGCCATTGTTGCTTCGACCTCAAAAATCTCTGCTGGACTTGGCCTTATCAAAGTTGACTTGGAAGAGTTAACGTCGAAAGACCCCCTTGGAGCGCTTGAATTAATGATGCACAGTCGGGGCTCATGTGATAAGGCTTCAAGCATATCAACTACTTCGGAGAGTGACTTTGGACAGTAA 717 0.4198 MASDSNSNLRINIESNPSESRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKVYTKESSEFVEFGAGDLVTIPKGLSSNEHVGDTFVDSPIQEVEHIIPEEAGNNGADDDYSPQRVAGETNRVAGKINVEELDKTIPEEQDLPTVVEILDDQTSEENFGEEEEEMPTQGGEREVAIVASTSKISAGLGLIKVDLEELTSKDPLGALELMMHSRGSCDKASSISTTSESDFGQ 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02598 238 PANTHER OS04G0445200 PROTEIN 6 87 - -
Tsu01g02598 238 Pfam EutQ-like cupin domain 23 93 IPR008579 -
Tsu01g02598 238 MobiDBLite consensus disorder prediction 218 238 - -
Tsu01g02598 238 SUPERFAMILY RmlC-like cupins 29 83 IPR011051 -
Tsu01g02598 238 PANTHER RMLC-LIKE CUPINS SUPERFAMILY PROTEIN 6 87 - -
Tsu01g02598 238 MobiDBLite consensus disorder prediction 222 238 - -
Tsu01g02598 238 Gene3D Jelly Rolls 2 93 IPR014710 -
Tsu01g02598 238 CDD cupin_TM1112-like 30 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02598 Tsu-Chr1 29037187 29039622 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02598 - - gmx:100793722 159.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g02598 01 29037187 29039622 Tsu01g02598 01 29037187 29039622 ECH
Tsu07g03761 07 43819949 43820528 Tsu01g02598 01 29037187 29039622 PCT